CI01000218_00048845_00054766


Basic Information

Item Value
gene id CI01000218_00048845_00054766
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000218
NCBI id null
chromosome length 266553
location 48382 ~ 54766 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000218_00048845_00054766.mRNA
TGCCGGATGCAGTGTAAGGACATCCCATCCGAGACCATGTACGACGTGCTCCACGACATCGAGTATCGGCGGAAATGGGACGCGAACGTCATCGAGACCTTCGACATCGGCAAACTGACGGTCAACGCAGACGTGGGCTACTACTCCTGGAAGTGTCCGAAGCCGCTGAAGAACCGTGATGTCATCACCCTGCGCTCATGGCTGCCGATGGGCAACGATTACATCATCATGAACTACTCCGTCAAACACGCTGCGATGAAGCGCATCAGTAAAGCGTGTCTTCGGTATCCGGAGTGGAAGCAGAAGCACAGTCCGGGTTTCAAGCCGTGGTTGTTCCCGGAGCAGAACCCGCTGTCCAGCGTCCCTCTAAGCTCCCTGACAGACAAAACCCCAGACCAGGCCGATGATGTGGAGGTGGGACTGGAAACCAAGGTGGAGCTGGCAGTTCAGGGAGCCAGGGTGGAGAAGGGAGAGTGGGAAGCCAGGACAGAGCTGAAGGCTAACAGAGTGGAGCCGATGGGGCTGGAGACCACCATGCTGGGCTAGAGAGGGCAGGGACTGCCAAGCTAGAGAGCCCTGGGACCTCCACGCTAGAGAGACCAGGCTAGAAAATGCTGGAACCTCCAGGCTAGAAAGCGCTAGGACCGCCAGGCTAGACAATGCTGGGACTGGTGGACTAGTGAGCACTGGGTCCTCCAGGCTAGAAAGCGCTAGCACCGCCAGGCTAGAGAATGCTGGGACCGGTGGACTAGAAAGCACTGGGACCTCCAGACTAGAGAGACCGGGCTAGAGAGCGCTGGGACCAGAGGACTAGAGAGACCGGGATAGAGAATGCTGGGACCTCCGGTATAACTGAAACTGTATATGGATCCTCAATGATGGATTGTGTTTTATCTTTGTAAATGTGTGTGTCAGCAGCTTTAGTATGTGTGTGTGTGTGTTTGTCACTTCCTGTTGTTTTAGAGAGCTGTTGTAACACCACGTGAACTCTACAGTAGAGTACAGTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000218_00048845_00054766.mRNA True 1009 mRNA 0.55 4 48382 54766

Neighbor

gene id symbol gene type direction distance location
CI01000218_00002879_00017799 ARAP1 coding downstream 30583 2879 ~ 17799 (-)
CI01000218_00064161_00064417 NA coding upstream 9310 64076 ~ 64473 (-)
CI01000218_00119041_00133536 INPPL1A, INPPL1 coding upstream 64275 119041 ~ 133536 (-)
CI01000218_00155323_00156947 NA coding upstream 100430 155196 ~ 156947 (-)
CI01000218_00167659_00171329 NA coding upstream 112328 167094 ~ 171329 (-)
CI01000218_00173197_00175957 EIF3K, IF3C coding upstream 118361 173127 ~ 176248 (-)
G393102 NA non-coding upstream 104737 159503 ~ 161366 (-)
CI01000218_00198649_00204828 NA non-coding upstream 149137 198234 ~ 204828 (-)
G393070 NA other upstream 122410 177176 ~ 178218 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_008849 stard10 coding NC_007126.7 CM002899.2 47746176 ~ 47774711 (+)
grasscarp (Ctenopharyngodon idella) G231004 NA non-coding CI01000054 null 3089984 ~ 3090270 (-)