G394884


Basic Information

Item Value
gene id G394884
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000223
NCBI id null
chromosome length 527161
location 343075 ~ 343301 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU452441
GTTTGATAAAGCAGGTGCGCTGGCGTCGTCTGCTAACAGGGGATCTGAACTCAACGCCTCAGTGAGCACAACATCTGTTCAATCCCATGAAGCCACAGAGCTCTTCATCCCTGATCTTTAGCGGCAGTGAGCGTCTCTGCAGTGTGGAGCTGATGTTGACCTCATCTCCGGCTCTCCTGTAATCAGGGCATCGCATTAACAAGCACTAATTGGATGCATTTCCCAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU452441 True 227 lncRNA 0.52 1 343075 343301

Neighbor

gene id symbol gene type direction distance location
CI01000223_00130956_00138068 PPCE coding upstream 204562 130956 ~ 138513 (+)
CI01000223_00028160_00034967 NA coding upstream 307461 28076 ~ 35614 (+)
CI01000223_00003244_00005296 NA coding upstream 337389 2279 ~ 5686 (+)
CI01000223_00348620_00349159 NA coding downstream 5263 348564 ~ 349912 (+)
CI01000223_00355374_00356838 NA coding downstream 12013 355101 ~ 357321 (+)
CI01000223_00375886_00389461 CLSPN coding downstream 32353 375654 ~ 391212 (+)
CI01000223_00398156_00405578 MGC84496, PSMB2.L, PSMB2, PSB2 coding downstream 54538 397839 ~ 405641 (+)
CI01000223_00426488_00432007 NA coding downstream 83087 426205 ~ 433444 (+)
G394858 NA non-coding upstream 55303 287494 ~ 287772 (+)
G394855 NA non-coding upstream 59673 283023 ~ 283402 (+)
G394852 NA non-coding upstream 68900 273887 ~ 274175 (+)
G394851 NA non-coding upstream 70099 272753 ~ 272976 (+)
G394847 NA non-coding upstream 77785 265085 ~ 265290 (+)
G394891 NA non-coding downstream 43487 386788 ~ 386993 (+)
G394903 NA non-coding downstream 113478 456779 ~ 466708 (+)
G394821 NA other upstream 197662 141645 ~ 145413 (+)
G394770 NA other upstream 280247 60880 ~ 62828 (+)

Expression


Co-expression Network