G398299



Basic Information


Item Value
gene id G398299
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000242
NCBI id null
chromosome length 629286
location 309054 ~ 369183 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU456796
TGAGTCCGGCTCCACACACTCTCCTCACCGACACTCTCTTCTTTCTCCGCTCTAACTTGAGAAATTCAGCACAGTGTTTATAAACTCCTCTGATCTGAATCACACAGCAGAAACCACAGGATCCTGAAGCAGAGAGCTCAGAGAGCTGACAGAGAGCACACCGTTTGTGTTTCTTGTTATACATACTGAATACAGACTGATAGATTAATAATTATAGCTTTTTTAAGACAGGGTTTCATAAATGTTAATGATGACTGTACAGTATGTGAGTTATACACTAACTCTGTTAACTTGTATATATGTATATATAAAATACTGTATAACTCTAAATAACACATT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU456796 True 339 lncRNA 0.37 2 309054 369183

Neighbor


gene id symbol gene type direction distance location
CI01000242_00272088_00293729 NA coding downstream 15325 271406 ~ 293729 (-)
CI01000242_00264251_00267773 NA coding downstream 41281 263213 ~ 267773 (-)
CI01000242_00230847_00255610 NA coding downstream 52846 230847 ~ 256208 (-)
CI01000242_00209467_00209713 NA coding downstream 99341 209259 ~ 209713 (-)
CI01000242_00054328_00061612 TYR coding downstream 247088 53115 ~ 61966 (-)
CI01000242_00385392_00398812 NA coding upstream 16044 385227 ~ 398812 (-)
CI01000242_00457985_00464094 FLJ13639 coding upstream 88781 456146 ~ 464094 (-)
CI01000242_00475400_00477268 NA coding upstream 106174 475357 ~ 478060 (-)
CI01000242_00499626_00500135 KCNE4 coding upstream 130358 499541 ~ 500690 (-)
CI01000242_00508735_00531321 NA coding upstream 139378 508561 ~ 531645 (-)
G398297 NA non-coding downstream 354 308239 ~ 308700 (-)
G398222 NA non-coding downstream 38630 268968 ~ 270424 (-)
G398277 NA non-coding downstream 61311 242422 ~ 247743 (-)
G398220 NA non-coding downstream 136036 155020 ~ 173018 (-)
G398325 NA non-coding upstream 28677 397860 ~ 398603 (-)
G398308 NA non-coding upstream 60500 429683 ~ 437756 (-)
G398337 NA non-coding upstream 128795 497978 ~ 498741 (-)

Expression



Co-expression Network