CI01000256_00072914_00083834


Basic Information

Item Value
gene id CI01000256_00072914_00083834
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000256
NCBI id null
chromosome length 242357
location 71915 ~ 83974 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000256_00072914_00083834.mRNA
CAATAAATGATAAAGCATGTAAGTTAGTTTTTAATACATGTGCAGTCTGTTATTTAAAGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGATGGAGAGGAAACACACGTGTATCATCATCATCATCATCATCATCATCATCCACTAACACACACACACACACACACACAGAGTCCCCACCGTCTTCATCTTCAACACTGCCTCTTGTGCATTTCAAACACAGCAAACTTCTGTCTGTCAAATGTCTGGCTTGAAGTGTTTGTGCATCTTTTTAAATAATAAGCATCAAAAAAGAGCATATCGACTGGTTCCTGAAGTAAAAATCACATTAATTTTAATAATGTTGTGATTCCTCTGGAGCTGATGAGTTTGGTTCATGGATCAGAATGCTTTTTGAAGATTTGTTTAATCCCTGTGTAGAAAATAAATAGGAATAGTACTTCCATACTTAAAGTGCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCACGGCAGCAGCAGTATTCATGAGGACGAGGAAGTGAGTCCGGAGCAGAAGGCCGAGCGGGAACGCGAGCGGAGGATGGCGAATAACGCCCGCGAGCGGCTGCGCGTGCGCGACATCAACGAGGCGTTTCAGGAGCTCGGCCGCGTGTGTCAGATACACCTGAAGAACGACAAGCCACAGACCAAACTGCTGGTCCTGCACCAGGCCGTCGATGTCATCCTGAGCCTGGAGCAGCAGAGTCTGTTGTCAGTCAGTACTGAGAGCTCATTGATGGTGATGGAGTCATTCAGACGCTCTCAGCTTGACCCGGTTCAGTCAGATGATTCGGGCTCGTTCGGGGTGAAGGTGCAGGTGCAGGGCATCGCCGGCCGGCCATATGTGGTCCTGAACGCTCAGGGGACACGCGTGCCACGCTCTCCGGACTATCCTGACGTCTTCCTGATGGAGCAGCAGAGGCAGGAGTTTGTGTCCAGTATGAGCGGTGGTGCTTCCAGTGCTCAAACTCCTCCACCGGATCATTATAGATCCCTGAGGACCTTCAGGAACCTGTCAGCAGCTCAGCTGCTGAACTACCAGAAGAACCCTGAGATCCTCCGACCGTACGACCCCAGGAGCGGGACGGTCTCTGGACGTGGCTGGTTCAGCAGCCCTTCCTCGCCCGTGATGGTGAAGAGAGCCAGGATCCCGCTGCCGGGAGCGGGATTCGCAGGCCCGTCGGTGGAGAGCGTCCCCTGCCAGCCGTCTCATATCATCTGCAGGCTGTCTGTCCCGGCCTCAGGTGGAGAGGTGGAGACGAACCACACCGGATCCCCTCGGACCGGACGAGTTGCTCACCGGAGCAGAATCACTCCTGAGGAAAAGAGGCGCTCCAGAAGCCTGGAGTCCAGATTCACCGGCTCTGTTCCAGGGACTCCCGCTGTCGGAACGGAAGGCCCGGATGTGAAGGCTGAGGTCACAGGGGTCGACTCAACATCTGCAGGGGTGAGGTCAGAGGTCAAAGAAGAGACAGAGAGAACAGCTCAGGCCACTCCTGATCTCCTGAAAGGACAGCGAGAGCTTCCGGATCAGCCCGATGAGGAAACCGCTAAACTGGTGATGGTTAACTACCTCAAAGATGGGTCCAGTGAGGGTGAAGCTGTTATCAGGCGGCGGGTGGAGCTGATGTTTGACCAGATCAACACGCTGAAGTTTAGAGCGCTGGAGGAGAACCGCCAGAGTTTGCTTGAGGAGAAGGAGGAGAGAAACGCGGAGCTGGAGAGACTCCAGGAGGCGCTAGAGAGGAGCGAACAGGAGCAGGTGACGCTGCGACACAAGCTGACCGACATGGAGAAAGAGCTGCAGACGTCACTCGACCAACTCCTGCAGGCCAGAAGGGCTCGTGATCAGTGTCGCTCTGACATGAGAGATCTCCAGCAGCAGCTGTCTGACATCCACGACGAGCTGGACAGCGCCAAGAGCTGCGAGGCCGGAGCGAGAGACGGGCTGCTGCAGGATCTGTGCGTGCTGCAGGGCGAGTTCGAGGCGCTGCAGCGGGTGCAGGAGGAGCAGGAGGAGGCGTTACGCCGCAGGGAGAGGGAGCTGACGGCCCTGCGAGGAGCGCTGGAGGACGAGATCTCTGCTCACGCCACAGACCTGCAGACACTGCAGGAGCAGCAGCAGCAGGAGATTCACCGCCTGCTGGAGGCCACCGACCAGGCCAAAGAGGCAAGGAGCTCACAAACACCTGGTGTGGCGCTGCTGGGACGGAAGGTTCTGGAGGTGGCGGAGGAGAAAGAAGCCAGTCAGACGCTGATCTCAGACCTGACGCAGACTAAAGCAGAGCTCATGCAGAAGACCGGCGCTCTGGAGGAGCAGATCTCCTCTCTCAACCTCCTCATCCAGCAGAAGGAGACGCAGGAGACGCAGCTCAGAGAACACGTGGAGCAGCTGATGGTGGAGAAACAGAATCTGGAGGAGGAGCTGCAGGAGGTCAGACAGCAGGAGGAGCACATGTGTGGAGCCAACCGAGCGCTGACCAGACACCTGGAGGACACGCAGAGTGAGCTGAGCAGGTTGAATCGAGCTCACCGTGAGCTGAAGGAGAGGTTTGAGGAGGAGAGCCGACAGATGGAGGAGCTGCGGAGGAGACGCAGTGAGTTAGAGGAGGAGAGGAGGAGCCAGGAGCGAGTGTTTGAGCGGCTGCAGGAGGAGGTGCGAGTGTGTGAGCTGGAGAGGAGTGTGATGGAGGAGCGCAGCGGCTCAGACTCGCTCATGAAGAGGCTGGAGAGAGGACGAGAGCAGAATAAGGATCTGCGGAGCCGCGTGTCTCAGCTGGAGGGATCTCAGCGCTCCGGGACGGACGCCGCCATCTCCAAACTCCAGCTCCAGGTTCACGAGCTGGAGGAGAGGCTTCTGGGAGAGGAGAAAGAGAACGGAGAGCTGCAGCAGCTGAACCGCCGGCTGGAGCGCCGCATGAAGGAGCTGACGCTGCACCTGGAGGAGGAGCGGCTGTCGCTGCAGGACCAGAGAGATCAGCTGGCACTGCGTCTGAAAACACTGAAGCGTCAGCTGGATGAGGCCGAGGAGGAGATGGAGAGGCTGGAGAACAGCAAGAAGAAGCTGCAGAGAGACCTGGAGGAGCAGCAGGAGCTGAACGAGCAGCTGCACACCGAGCTCTGCGGCCTCAGGCGCAACAACAGACCCAATAAACTACAGCCTACAGCTGATGATGAAGATGATGATGAAGATGAGACTGACGCAACACTAGACACACAATAACCTCTGAACATGTAACTCATCACAACTACAGTAAACCAGCTGTCACTCAGAATCAGGTTAATTCATGAGTTCACTCTCACTCCTCATCATGTGTGTTTGATCAGAAATCACTGTAAGATAAATATGGTTCATATGTTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000256_00072914_00083834.mRNA True 3821 mRNA 0.49 15 71915 83974

Neighbor

gene id symbol gene type direction distance location
CI01000256_00042139_00049433 NA coding upstream 21226 41383 ~ 50689 (+)
CI01000256_00084647_00096001 AQP9A coding downstream 615 84589 ~ 96001 (+)
CI01000256_00119208_00121266 NA coding downstream 34841 118658 ~ 121375 (+)
CI01000256_00188080_00194733 NA coding downstream 103509 187483 ~ 195611 (+)
G400281 NA non-coding upstream 11747 57307 ~ 60168 (+)
G400290 NA non-coding upstream 50728 19530 ~ 21187 (+)
G400313 NA non-coding downstream 68007 151981 ~ 152629 (+)
G400317 NA non-coding downstream 99666 183640 ~ 184811 (+)
G400326 NA non-coding downstream 114559 198533 ~ 204038 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) G30235 cgnl1 non-coding NC_053114.1 CM020911.1 27130176 ~ 27131908 (+)
bowfin (Amia calva) AMCG00010329 NA coding CM030129.1 CM030129.1 24636157 ~ 24642653 (+)