XLOC_012375



Basic Information


Item Value
gene id XLOC_012375
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 46912542 ~ 46913002 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00025002
GAGCAGAAGAAGGAGAACGGTGGAGATATACTTGAAGACCTGGAGCTCATGAAGCAGGTAGTGCTGCTTGAACAGACTAAACAATGGAGTTAGTTtcaaaagaaatgtattaaaattagttaaagacctgatatctttctctttgacaggttggcatggagcatgtgaaggaacagggaaacacactgtaatgacaagtgcatcgtaataaattaggtacagccttaaactttaagttgagtcaactgaactttataaaacattttaaacttatacaattacatttttacagagtaAGTGTCACAGAAGGGACGACATTCAGTTCAGTAATATAACAGGACGTCAGGTGAGTATAAGCAGGTGAGTTTATTGATGCAGATAATAAGTCCATTAACCTGAATTGGATATTTGATTATGCAGGCTTGGAGACTGGAGACGGATACCACAGACAGCAAACAGGA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00025002 True 461 lncRNA 0.38 1 46912542 46913002

Neighbor


gene id symbol gene type direction distance location
XLOC_012374 CU137681.4 coding downstream 6542 46885146 ~ 46906000 (-)
XLOC_012373 pimr23 coding downstream 62243 46848659 ~ 46850299 (-)
XLOC_012372 NA coding downstream 68525 46843700 ~ 46844017 (-)
XLOC_012371 CU137681.3 coding downstream 80453 46827818 ~ 46832089 (-)
XLOC_012370 CU137681.7 coding downstream 92697 46819748 ~ 46819845 (-)
XLOC_012376 pimr25 coding upstream 18917 46931919 ~ 46933567 (-)
XLOC_012377 CU137681.8 coding upstream 65853 46978855 ~ 46979490 (-)
XLOC_012378 si:ch211-244k5.1 coding upstream 76111 46989113 ~ 46990003 (-)
XLOC_012379 CABZ01056321.1 coding upstream 170444 47083446 ~ 47090440 (-)
XLOC_012380 CU915775.1 coding upstream 173680 47086682 ~ 47142249 (-)
XLOC_012368 NA non-coding downstream 115789 46795522 ~ 46796753 (-)
XLOC_012381 NA non-coding upstream 210350 47123352 ~ 47126889 (-)
XLOC_012383 NA non-coding upstream 528635 47441637 ~ 47444932 (-)
XLOC_012384 FP015852.1 non-coding upstream 597278 47510280 ~ 47510396 (-)
XLOC_012385 CU424460.1 non-coding upstream 1249949 48162951 ~ 48163065 (-)

Expression



Co-expression Network