CI01000299_02706136_02711943 (STK16)


Basic Information

Item Value
gene id CI01000299_02706136_02711943
gene name STK16
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 2705873 ~ 2713740 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_02706136_02711943.mRNA
ATATAAAGAGCCAATCAGACAGCTCCGTTCTACACCGTGAGGTGAATAATTTATTTTAGTGAAAAATTGAACACTGGCAGTGGCTTATGTGAACATGCAGTATTTAACTGGCATTCTGAATAAGAAGTATAGAATAAAAAACAGAAAAATGTGAATATGGAATAAAATACATTTTGAAAACATGAATATAAGTAATAAAGTCATGATCACTTTCAGTGCCTCTCCTCCATCCATGGTTGGTCCTAAGCAATGCTCCAGAGAAAATGGGACAAGCTTTGTGTATCTGCTCGCGCAGTGTCATCACAATTGACAACAAGAGATACTTCTTCCTCCAGAAACTAGAAGAAGGAGGTTTCAGCTATGTTGACCTGGTCGAGGGTGCACATGATGGACGCTTCTATGCTCTAAAGCGAATCCTTTGCCATGACCGCGAGGCCCGTAAGGAGGCTCAGACCGAGGTGGAGATGCACCGCCTCTTCAACCACCCCAACATCCTCACCCTGACCTCACACACCTTCATGGAGCGTGGCGGAAAGTGCGAAGCCTGGCTGTTGCTCCCGTACATCAGTAAGGGAAGTCTGTGGTCTGTTCTTGAGAAGCTGCGGGATAAGGGGAGCTCTATGCCTGAGAGTCGCATCTTGCACATTCTTCATGGCATCTGTGAAGGCCTCAAAGCAATTCATGACAAAGACTATGCACACAGGGATTTGAAACCCACCAACGTTTTACTGGATGAGAACGATCAGCCTTTTTTAATGGATTTGGGCTCCATGAACAAGGCCAGGATTGAAGTTCGAGGGTCACGGGAGGCCATGACAGTCCAGGATTGGGCTGCTCAGAGGTGCACCATCTCCTACAGAGCACCAGAGCTATTTAATGTGGAGAGCCACTGTATCATTGATGAGAGAACAGATATTTGGTCTCTAGGTTGTGTACTATACTGTATGATGATGTTGGAAGGACCGTATGACTTGATATTTCAGAAGGGTGACAGCGTGGCTCTCGCCGTCCAGAATCCAGTCTCCATTCCACAGCCGTGCAGTTATTCTCAAGGTCTTCAAACCCTTCTCAGCTCCACTATGGTGACCAATCCTCAGGAAAGGCCCAGAATCAGCTGGGTGCTTGACCAGGTCCAGAACCTTCGAGGCTCAGACGGTACAGATGTAGATACCAACAGAGTATGATGCTACCACTGAGATTTCATGCTTGTTTTCCAGTGGACTCCAGACTTTTTGGACTATGCACTCTCTCTTTCGGACAAAAATCACAAGCCTTGCAAACATTTGCTCTCTCTTACCTCAGTGAGCTCAGCATGCCTTAGTTACACACGCAAATTTGTTGGTGAATCTCACATTTTTACCCCAAAATCTGTTTTGAGCAATGAAATTATCTGATGATTTTGGGGTAAAATATGAGTTGGGCATGTTCCTGATTTATGCCACACAAACCACACGAGAGGGCAAAACCTCTGTTCACCACAATGGCACCTGTTACGTATCATCAAACTGGATGTTTTCTGATTGTAATTTGGCTTCTCTGTCTTTTTCCACATTTCTTAGCTTGTACATTCTTAGGAACCAAAAAAATATTTATGACAGTTTCAACTGAGTGCTGCAGGGATGATGTCAAAACCTAAAAAGACTAATTCGCCAGTGATTCCCTCGGGATGAGTAAAATAAGCTCTGTGGTAAACATAACATGACGATACTTGGACATTTTGCTCAATGTAAATTGCATACACCCCATATCGAAAACGTACAGAGCCCCGCACATGATATGCAGGGGGGAAAAAAAGTAAATTGTGTGCACGATTTAAAGACCAATTTGCTAAATTGTGTGCACGATTTACTATTTCGTTCCCTGGATTTGAAATCATGCACACGATTTACTATTTCATTCCCTGGATTCGCTAAATCGTGCACACGCTTTACTATTTTGTTCCCTTAATTTGCTAAATCGTGCGCATGGTTTACTATTTCGTTCCCTCTATTTTCTAAATTGTGCGCACGATTTACTAATTTGTTCCCTCGATTTGCTAAATCGCGCCCAAAATTTACTAATTCGTTCCCTCGATTTGCTAAATCGCGCCCACGATTTACTAATTCATTCCCTCTATTTATAAATCGTGCGCACGATTTAACCTATTTTTTTTTCCCTGCATGGCATGTGCGGGGCTCCATAAAAACGCAAATTTTGAAGCTGTTATGTTTATTTTAAAAAATGTTTTTAATATGTAACTAGATAAGAATGTTTGGGATGGGAGTGTGTGCATGTTTACGTTGTAGAACAAAACGTCCAAGTATTGTCAAGTTATGTTTACCACAGACTTTATTTTACTCATAAATTGAAAAACCCATAGGAAAATCTCGAGGGAATCACTGGCGAATTAGTCTTCCGGGTTTTGACGTCATCCCTGAACAACTCTATCGACATTTTAGCTGTTTGAAATGTAATTGACATTAGTTTGTTTATTTAAACAACAGTTCTCCTGGTAAAGCAAGACATCCGAGGCTTTTTATGAGCAGAGATTTAGAGACTTTGTGTTGTAAAGGTTCAAAGATAAAACTGCAATTGGTCTTTAAATCAAGAACGGATTTCTGTCTCAGTCGTTTGTAAATGCATTCGTATGTACGTTGTAGCATTGAAAAAATAGTTCTGCTCATGTAAAATGAATGAGTCTGGAAAAAAATGGCTGAAAAATTAAAGAGTAAGTTATTAACTTTAACTCGGTTGGTTATAGCGCTCAGCTTTTATTAGCATGTGAAAGTGGTGTTCTGTGTGAGACTTTGAGAGGATTCATAATGAATGGTCATGCCTGTGAATACTTAATACTAGTTCACATTACTTTGCAAGAATGATGTGTTCCCTTTTCTCTTTTTAAGTGGTATAAATGACTGCATAAATATGAATTTGTTTTGATTTAGCAAGAAGTTCCTTTCATTGCTTACAGTATTAGGGTGTTCTTTAAAGGGAACTGTGTA

Function

symbol description
stk16 Predicted to enable protein serine/threonine kinase activity. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in Golgi apparatus. Orthologous to human STK16 (serine/threonine kinase 16).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K08856 STK16; serine/threonine kinase 16

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_02706136_02711943.mRNA True 2981 mRNA 0.41 7 2705873 2713740

Neighbor

gene id symbol gene type direction distance location
CI01000299_02696797_02704180 TUBA1C, TUBA1B, TUBA1A, TUBA8L2, TUBA4B.S, TUBA4A, TUBA4B coding upstream 1653 2696632 ~ 2704220 (+)
CI01000299_02612562_02613926 NA coding upstream 91081 2612499 ~ 2614792 (+)
CI01000299_02195854_02198465 NA coding upstream 506948 2195798 ~ 2198925 (+)
CI01000299_02118245_02120332 SLITRK1 coding upstream 584015 2116861 ~ 2121858 (+)
CI01000299_01855614_01858092 SLITRK6 coding upstream 847170 1855614 ~ 1858703 (+)
CI01000299_02753238_02760499 PUR9, ATIC coding downstream 39498 2753238 ~ 2760953 (+)
CI01000299_02813216_02818668 CPO coding downstream 99401 2813141 ~ 2819096 (+)
CI01000299_03144958_03149338 NA coding downstream 430650 3144390 ~ 3149340 (+)
CI01000299_03157191_03166687 ABCB6, ABCB6A coding downstream 443451 3157191 ~ 3166701 (+)
CI01000299_03170577_03174986 CNPPD1 coding downstream 456837 3170577 ~ 3175003 (+)
G405366 NA non-coding upstream 50460 2655180 ~ 2655413 (+)
G405365 NA non-coding upstream 52257 2653406 ~ 2653616 (+)
G405364 NA non-coding upstream 52720 2652908 ~ 2653153 (+)
G405362 NA non-coding upstream 61020 2644549 ~ 2644853 (+)
G405361 NA non-coding upstream 61414 2644092 ~ 2644459 (+)
G405385 NA non-coding downstream 7122 2720862 ~ 2721324 (+)
G405390 NA non-coding downstream 16533 2730273 ~ 2730509 (+)
G405407 NA non-coding downstream 96712 2810452 ~ 2810672 (+)
G405611 NA non-coding downstream 495186 3208926 ~ 3209411 (+)
G405618 NA non-coding downstream 606784 3320524 ~ 3321012 (+)
G403972 NA other upstream 2099523 604870 ~ 606350 (+)
G403609 NA other upstream 2295085 364139 ~ 410788 (+)
G403578 NA other upstream 2633602 35462 ~ 72271 (+)
G405609 NA other downstream 440857 3154597 ~ 3155174 (+)
CI01000299_04131136_04133439 PCNP other downstream 1417518 4131060 ~ 4133941 (+)
G405842 NA other downstream 1581793 4295533 ~ 4320141 (+)
CI01000299_04480751_04492829 NA other downstream 1776078 4480553 ~ 4493116 (+)
CI01000299_04703290_04704365 NA other downstream 1988642 4703071 ~ 4704780 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location