CI01000299_06337727_06341840


Basic Information

Item Value
gene id CI01000299_06337727_06341840
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000299
NCBI id null
chromosome length 6567443
location 6337139 ~ 6341840 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000299_06337727_06341840.mRNA
TTGAGTTTGACTCCAGCGCAGCTGTTGCTGCAGCAGACGCAGGCGCAGCTCATCGCAGCCGTGCAGCAGTCGGCAGGTCAACAGAGCAGCACCACTGGAGCCAATATCTCCGCCTCCGCGGCCACGCCCATCACTCTGTCCCAGCCCATCCAGATCGCATCTCCGGGTCACTCCATCAGCCCTCAGATTCAGCCCCAGTTCATCATCTCTCCGTCTCCTCAGGGTCAGACCGGTCTCTTGCAAGCTCAGAATATCCTGACTCAACTACCTCAAAGCCAAGCCAGCCTCCTGCCCGCTCAGACCAGCATCGCTCTCACCACACAGGCGGCCACACCGACGAGGAAGATCGCGGCCATGCCGTCTCCCGCGGCTCCCACTCTGAAGCGCGTGGACGGCCCGTGTGTGGAGGAGGCCAGCGACCTGGAGGAGCTCGAGCAGTTCGCAAAGAACTTCAAGCAGAGACGCATCAAGCTGGGCTTCACTCAGGGTGACGTGGGGTTAGCGATGGGGAAACTCTACGGCAACGACTTCAGCCAGACCACCATCTCCAGATTCGAGGCCTTGAACCTGAGCTTCAAGAACATGTGCAAACTCAAACCACTGCTGGAGAAATGGCTCAACGACGCAGAGAACATGTCAGCTGACTGCGTGGTGTCGAGTGCGAGCGAGATGTCTCCGGGTCTCTGCGAGAGTCTGAACCGGCGGCGTAAGAAGCGGACCAGCATCGAGACCACCATCCGTCTGGCATTAGAGAGGAGCTTCCTGGAGCAGAGTCAGAAGCCGTCATCGGAGGAGATCACAGTGATTGCGGATCAGCTCAACATGGAGAAGGAGGTGGTGCGAGTTTGGTTCTGTAACCGCAGACAGAAGGAGAAGAGGATCAATCCTCCCAGCAGCTGCAGCGGATCGTCCGCGTCAGCCATCAAAGCCATCTACAGCACCTCCAACACTGCAGTGTCCAGCGGCACAAACACACTGACGGTGAATTCTGTAGTTCCACTGAGCGCCAGCAGCATCTCAAACCTCACGCTCGGTGGCGCTCTGGCTCAGGTGACGTCACACACTCCGTCGGTCATCTCCATGGCACCAGCCATCGCTACGCCCGCCCCCACTGTGACATCACCATCACTGACCACGTCCGTTACTGCTGTGAAACAAGAGTTGAGCGCAGTTTCCTCGGCAACCACGGTCACGCAGGGGGCGGGGCAGTTGCTGGTGACGGGCACAGGACTGGGCGGAGCTAATCTGACTGCTGTTACTGGGGGTTTGAACCCAACGATCATAACGCCCTCGCAGCTGACGCAAGGTGGGACGCTGCTGAGTTTGACTCCTGCTCTGGGAAACACGTTGATGAACAACAACACACTGGCCACCATCCAGGCAGCTCTTGCGTCGGGCGGCGCTCTGCCTCTGACGTCCATCGACGGAAACACCGGCCTGCTGTTCGCCAACACCAGCGCAGGAAACCCCGCCTCCGGCCTGATGACCACGCCCTTCTTCCTCAACCCGTCCGGCTTCTCTCTGCTGCCCGCCAATCTCCTGTCAGCGGGCGGGGCTGGAGGCGGAGCTCTCAACCTGCATGTGACCAGCGATGTGCAGCAGAGTCCTGTTGCCACGACGACGAAGAACGTGGCCTTGGCCTCGAAGGCTCAGTGAGCGCGTTCGGCTGCGATTAATCCTGTTGCTATTACCAAAAACACTTCTGACCGGTGTAGTGAGCGCAGGACTGACGAGCGACCGCCGGGTTTGTTGTATGATGCCACGCGCTCTTGGACACGGTCAGGATGGAACTTTATTTTTGCATTATTTCTCAAACTAACGTCTAAATTAACCAAAAATGTGAGACTTTTTCATGACGGCAGATTCTTCACGAGAGATTATTTCACGTAACAGAGTTTATATTGACTTTCTATGAGGGGTTCTGTTGTTTTTATTTGCGGCTCTGTGAAACGGGCCGATTGTAGATTTATAACCAAAAGCATTTCAGATGTTTTATGTTGCGAGTTACTGCAGCGCGTCGGTGGAGGTTCTACCCGATGACTTTTTAAACTAGTACTCTAACTCGACATCACTTTATAAATACGGTTAGAAGGCTTTAAACTAGTAATAATCCGTCACAGTGAGCGCGTCTCCTGTGAGAAATGCAATCTGTCACACGTTTGTCTGAACACTGATTGTGTTTGTAGTGTTGATGTGAGTCAGCGGCGGCAGAGAGACGAGTTCATTCAGCATGAATCTATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000299_06337727_06341840.mRNA True 2244 mRNA 0.55 11 6337139 6341840

Neighbor

gene id symbol gene type direction distance location
CI01000299_06320613_06321046 NA coding downstream 16093 6320564 ~ 6321046 (-)
CI01000299_06310939_06311125 NA coding downstream 25910 6310939 ~ 6311229 (-)
CI01000299_06306931_06307410 NA coding downstream 29729 6306100 ~ 6307410 (-)
CI01000299_06299968_06305021 NA coding downstream 31981 6298896 ~ 6305158 (-)
CI01000299_06295715_06298755 F7 coding downstream 38364 6295613 ~ 6298775 (-)
CI01000299_06352251_06359190 DUSP27 coding upstream 9595 6351435 ~ 6360203 (-)
CI01000299_06362136_06376918 NA coding upstream 20164 6362004 ~ 6377235 (-)
CI01000299_06476844_06477950 PRS23, PRSS23 coding upstream 134143 6475983 ~ 6479549 (-)
CI01000299_06497414_06502931 CK073, HIKESHI coding upstream 155316 6497156 ~ 6502931 (-)
CI01000299_06505676_06510021 EED, EED.S, EED.L coding upstream 163717 6505557 ~ 6510144 (-)
G407939 NA non-coding downstream 104864 6226412 ~ 6232275 (-)
G407923 NA non-coding downstream 114760 6220766 ~ 6222379 (-)
G407975 NA non-coding downstream 153604 6183135 ~ 6183535 (-)
G407971 NA non-coding downstream 191215 6145497 ~ 6145924 (-)
G407895 NA non-coding downstream 222649 6108478 ~ 6114490 (-)
G407986 NA non-coding upstream 47536 6389376 ~ 6389644 (-)
G407927 NA non-coding upstream 50204 6392044 ~ 6392356 (-)
G408001 NA non-coding upstream 75286 6417126 ~ 6432767 (-)
G408009 NA non-coding upstream 97681 6439521 ~ 6439736 (-)
G408010 NA non-coding upstream 98407 6440247 ~ 6440470 (-)
G407805 NA other downstream 501150 5835889 ~ 5835989 (-)
CI01000299_05428160_05443433 APP, APPA other downstream 881031 5427661 ~ 5443433 (-)
CI01000299_04913779_04927715 NA other downstream 1408321 4913373 ~ 4927715 (-)
G407413 NA other downstream 1786418 4475994 ~ 4550721 (-)
CI01000299_06526127_06532048 CEP97 other upstream 190161 6526127 ~ 6532048 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location