CI01000300_00180177_00181561


Basic Information

Item Value
gene id CI01000300_00180177_00181561
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 180120 ~ 181617 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000300_00180177_00181561.mRNA
GTATATGAGTGACGTTCCCATCAGCAGGGTCACGTTGCTGCCCACCGTTCTGTCATCATGACCACCGGTGAGGACACAGAACCAACCCTGTGGCCGGATCGGGCCCAAGCCACCCTGACTATGCCAGCACAGGCTGAAGGCCCATGCCTCGAGGAGGCAGAGGACCTGCCCGGTGGCCTTACTGGAAGTGGCGGAGCATCTTGGGAGTCCATTGGCAGTGTGACAGAGGTGAAGGAGAATGGGCAGCTTCCATATCCGTCCCTTGCTCCAGTGGTGTTCTTCTGGCTCCATCAGAGCACACGACCCCGCAGCTGGTGCCTTGCACTCTCGGTGATGTTCGCCATGGCCGTGAGCCAGCCTCGCGCTGATGAATAATTGCTGCATGCGGCGTGGTTTGTCCATATTGTTCACTTGCTTCTCCCCTCTGTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000300_00180177_00181561.mRNA True 431 mRNA 0.59 2 180120 181617

Neighbor

gene id symbol gene type direction distance location
CI01000300_00150486_00160308 NA coding upstream 19605 150486 ~ 160515 (+)
CI01000300_00103395_00123529 SLC5A10 coding upstream 56591 103395 ~ 123529 (+)
CI01000300_00003224_00007587 NA coding upstream 172086 3224 ~ 8034 (+)
CI01000300_00226653_00303160 NA coding downstream 45036 226653 ~ 303160 (+)
CI01000300_00313257_00313598 NA coding downstream 131640 313257 ~ 313641 (+)
CI01000300_00324861_00371897 NA coding downstream 142949 324566 ~ 372421 (+)
CI01000300_00373895_00378177 ALKBH5 coding downstream 192278 373895 ~ 378403 (+)
CI01000300_00380880_00388140 MIEF2 coding downstream 199263 380880 ~ 388565 (+)
G408104 NA non-coding upstream 32885 146998 ~ 147235 (+)
G408066 NA non-coding upstream 148854 29140 ~ 31266 (+)
G408059 NA non-coding upstream 161832 17958 ~ 18288 (+)
G408058 NA non-coding upstream 163195 16689 ~ 16925 (+)
G408056 NA non-coding upstream 164951 14895 ~ 15169 (+)
G408149 NA non-coding downstream 47782 229399 ~ 229789 (+)
G408162 NA non-coding downstream 97183 278800 ~ 279317 (+)
G408163 NA non-coding downstream 107037 288654 ~ 288963 (+)
G408166 NA non-coding downstream 112933 294550 ~ 294974 (+)
G408171 NA non-coding downstream 138992 320609 ~ 320843 (+)
G408510 NA other downstream 794983 976600 ~ 977099 (+)
G408498 NA other downstream 835450 1017067 ~ 1020734 (+)
G408910 NA other downstream 1451413 1633030 ~ 1634969 (+)
CI01000300_01753916_01754815 NA other downstream 1568283 1753916 ~ 1754980 (+)
CI01000300_02313596_02320912 NA other downstream 2131792 2312515 ~ 2321088 (+)

Expression


Co-expression Network