CI01000300_03901275_03902800


Basic Information

Item Value
gene id CI01000300_03901275_03902800
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 3901148 ~ 3902892 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000300_03901275_03902800.mRNA
CTTTATAAGAGCTGCAAGCTTCACAATGTGGACAGAATTCACCAACAGAGCTGAACACCTACAGCATCGAGCATCAACAATACTTTTACTTTTGTTATTTTCATTAGTAAATCTTCTCGTTGGCAGAATGAACTGCAAAATCTTTTCAGTCTTTGTTATTGTTGCTGTGGCATGTCTGACCATTACTGAAGCAATGAGTCTTAGAGGTCTGGGTGTAGATCTACGCTGTCGCTGCATTAAAACAGAGAGTCGACGCATTGGTAAACACATAGAGAGTGTGGAGCTCTACCCTCCTAGCCCTCACTGTAAAGATACAGAGATCATTGCCACCCTGAAGGAAACCAAGCAGGAGATCTGTCTGGACCCTACTGCTCCCTGGGTTAAGAAGGTCATTGAGAAGATCCTTGCCAATCTTGCCCTGCATACCGAGAAGGTTAGAAAGGTACATCTGGCAAACTTGTTTCTATACAAGACTGCACATGTTGCCACAGATCACGTGAAGACTTGTGACCACATCAAGAGAAAACACCATTCTGTTGCACCATCAGGCACTCCCCCATTATCTCTCGCTAATTTCATTGCACTTTAAACAATGGCAAGTATTTTCGTTATATTACAGGAAGTATTCACGACTGTGATGTTAGATTATCAGGTCAACCTATAATAATCAATGTGGGAGTA

Function

NR:

description
interleukine-8

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000300_03901275_03902800.mRNA False 681 mRNA 0.42 4 3901148 3902892

Neighbor

gene id symbol gene type direction distance location
CI01000300_03773519_03831065 NA coding upstream 69726 3773362 ~ 3831422 (+)
CI01000300_03769789_03773233 NA coding upstream 127886 3768199 ~ 3773262 (+)
CI01000300_03752633_03755353 NA coding upstream 144288 3752633 ~ 3756860 (+)
CI01000300_03744731_03749017 NA coding upstream 152125 3744410 ~ 3749023 (+)
CI01000300_03694786_03699730 NOCTB coding upstream 201175 3694786 ~ 3699973 (+)
CI01000300_03924558_03934407 PPP2R2CA, PPP2R2C coding downstream 21666 3924558 ~ 3935360 (+)
CI01000300_03954605_03969070 CRMP1 coding downstream 51713 3954605 ~ 3970439 (+)
CI01000300_03972562_03976190 NA coding downstream 69670 3972562 ~ 3976225 (+)
CI01000300_03981015_03991839 NA coding downstream 78123 3981015 ~ 3992010 (+)
CI01000300_03994394_03997804 CHIC2 coding downstream 91502 3994394 ~ 3998763 (+)
G410335 NA non-coding upstream 24112 3876685 ~ 3877036 (+)
G410334 NA non-coding upstream 25046 3875892 ~ 3876102 (+)
G410263 NA non-coding upstream 182406 3707467 ~ 3718742 (+)
G410253 NA non-coding upstream 317034 3583880 ~ 3584114 (+)
G410242 NA non-coding upstream 347162 3553750 ~ 3553986 (+)
G410345 NA non-coding downstream 8482 3911374 ~ 3913993 (+)
G410320 NA non-coding downstream 13869 3916761 ~ 3938947 (+)
G410323 NA non-coding downstream 36145 3939037 ~ 3939682 (+)
G410353 NA non-coding downstream 49938 3952830 ~ 3953045 (+)
G410354 NA non-coding downstream 50284 3953176 ~ 3953414 (+)
G409984 NA other upstream 628750 3271685 ~ 3272398 (+)
CI01000300_02313596_02320912 NA other upstream 1587254 2312515 ~ 2321088 (+)
CI01000300_01753916_01754815 NA other upstream 2142112 1753916 ~ 1754980 (+)
G408910 NA other upstream 2266179 1633030 ~ 1634969 (+)
G408498 NA other upstream 2880414 1017067 ~ 1020734 (+)
G410382 NA other downstream 220806 4123698 ~ 4124416 (+)
G410388 NA other downstream 292754 4195646 ~ 4196555 (+)
CI01000300_05891147_05892754 HELT other downstream 1988175 5891021 ~ 5892824 (+)
G411777 NA other downstream 2566353 6469245 ~ 6469705 (+)
G413459 NA other downstream 5041591 8857687 ~ 8948603 (+)

Expression


Co-expression Network