G408197


Basic Information

Item Value
gene id G408197
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 372900 ~ 373116 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU469050
ATTATAGGTGACATTTGGAAATTCTATTTTTGTTATAATAATAATAATAAAATAATTAAACGCAGTTCTAGTTTTATGGAACAACAGTTTTTGTTGTTGTTGTTGTAACTGAAAAACAAAATAATTATAAAAATACAATAATGCTGTCAGCACATGTTCCGGGCATGTAAGAGCTATTGAGGACCCAGGTTTGAGTCTGTTCTGGGTCATCCCATTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU469050 True 217 lncRNA 0.31 1 372900 373116

Neighbor

gene id symbol gene type direction distance location
CI01000300_00324861_00371897 NA coding upstream 479 324566 ~ 372421 (+)
CI01000300_00313257_00313598 NA coding upstream 59259 313257 ~ 313641 (+)
CI01000300_00226653_00303160 NA coding upstream 69740 226653 ~ 303160 (+)
CI01000300_00180177_00181561 NA coding upstream 191283 180120 ~ 181617 (+)
CI01000300_00150486_00160308 NA coding upstream 212385 150486 ~ 160515 (+)
CI01000300_00373895_00378177 ALKBH5 coding downstream 779 373895 ~ 378403 (+)
CI01000300_00380880_00388140 MIEF2 coding downstream 7764 380880 ~ 388565 (+)
CI01000300_00390712_00395191 NA coding downstream 17495 390611 ~ 395743 (+)
CI01000300_00422911_00432735 NA coding downstream 49475 422591 ~ 432772 (+)
CI01000300_00486146_00492357 FSCN1B, FSCN1 coding downstream 112778 485894 ~ 492836 (+)
G408172 NA non-coding upstream 51824 320877 ~ 321076 (+)
G408171 NA non-coding upstream 52057 320609 ~ 320843 (+)
G408166 NA non-coding upstream 77926 294550 ~ 294974 (+)
G408163 NA non-coding upstream 83937 288654 ~ 288963 (+)
G408162 NA non-coding upstream 93583 278800 ~ 279317 (+)
G408141 NA non-coding downstream 68336 441452 ~ 478136 (+)
G408216 NA non-coding downstream 77422 450538 ~ 461022 (+)
G408235 NA non-coding downstream 170133 543249 ~ 543488 (+)
G408238 NA non-coding downstream 177364 550480 ~ 550839 (+)
G408239 NA non-coding downstream 178383 551499 ~ 552763 (+)
G408510 NA other downstream 603484 976600 ~ 977099 (+)
G408498 NA other downstream 643951 1017067 ~ 1020734 (+)
G408910 NA other downstream 1259914 1633030 ~ 1634969 (+)
CI01000300_01753916_01754815 NA other downstream 1376784 1753916 ~ 1754980 (+)
CI01000300_02313596_02320912 NA other downstream 1940293 2312515 ~ 2321088 (+)

Expression


Co-expression Network