CI01000304_10119297_10119833


Basic Information

Item Value
gene id CI01000304_10119297_10119833
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000304
NCBI id null
chromosome length 18613800
location 10118890 ~ 10119833 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000304_10119297_10119833.mRNA
GTCTACAGGTACAAGGCAAGGAATTCTGGGAAAGGAGCCCAGAGGTCAGCAGGTGGCATCGATAATATTGCCATCCATCTGGTGGCGATAAACTACCCGTGCTTTGTGGGAAAAATAGACGGGACGTGCGGCGCTTTCCTCTCCGTCGTAACCCCAGGAGACTGTCGGAGAGAAGCCAGGTTGCACCTCAACAGATGGCACTGTGAACACAGAGAGAAAATGAATCTACAATATCAAGTATTGAAAGACGGTTTGACTTATAACTTCATTAGCAGGATATCAGGACAAAATTTGGTTAACAAGGGAACTTACCAGGCGGAGGAGGGCACAGCCTGCTTTTACCACGGTCTTTACAGCGTTTGTACCAGGGAAAACACTGCAACACTTTCTTACCCATGGCTTGCCCAATTTAGAGATCTGGAGAGAGAGAAAAATGTGAAAGGTCTACTGACAGAAGAACATGGAGTTTCAATGCCATTGTGTTTGTTTCTTCAAGCTTATCTCGATTCTCTGACCGGAACATTAGCTGAGAGGTGAAAGCAGGAGACTGCTAATAATGGCTCAAAGAAACAAAGAGCTCATTCATCCTGAGAGGATTAATCCTCAGTCATGTCTGAGGCTTGTACTACACAGTACTATATCATTTGAGCGGGGCACACAGTTGTGTTCCCTGGCCCACTTCGGAGGGCTGGAACACCCGAACAAGAACAACCAGCTCTGACTCCACAATTAGCCACAACGTCAGTGTAACACATAAATCTTAACTACAGGAAGAGAACCGCTATATAATAACAGAACACTTATGTTACGTAAATAATGAGCAGCACCACCCGTTTATTTAGCAGAATGGGACTATGATTTATTTTGTAAGCTGTAAATCATTAAAACGTTCCAGATGTGACAAATGTATTGTATTTACAAAGGAATACCACTAGTAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000304_10119297_10119833.mRNA True 944 mRNA 0.44 1 10118890 10119833

Neighbor

gene id symbol gene type direction distance location
CI01000304_09955649_09957311 NA coding downstream 159583 9955554 ~ 9959307 (-)
CI01000304_09949821_09951564 NA coding downstream 165633 9949165 ~ 9953257 (-)
CI01000304_09944778_09945833 NA coding downstream 173057 9944623 ~ 9945833 (-)
CI01000304_09765626_09814386 FGF11B, FGF11, FGF11A coding downstream 304504 9765626 ~ 9814386 (-)
CI01000304_09751291_09754997 CLDN7B, CLDX, CLDN7 coding downstream 363645 9750921 ~ 9755245 (-)
CI01000304_10123588_10128249 PCOLCE, PCOLCEA coding upstream 3574 10123407 ~ 10128249 (-)
CI01000304_10137324_10147067 PER1A coding upstream 17207 10137040 ~ 10149531 (-)
CI01000304_10160458_10161768 VAMP2 coding upstream 40625 10160458 ~ 10163762 (-)
CI01000304_10167646_10169639 NA coding upstream 46354 10166187 ~ 10169639 (-)
CI01000304_10187728_10188909 NA coding upstream 67438 10187271 ~ 10188909 (-)
G424474 NA non-coding downstream 28663 10082398 ~ 10090227 (-)
G424482 NA non-coding downstream 56138 10062265 ~ 10062752 (-)
G424448 NA non-coding downstream 82822 10033594 ~ 10036068 (-)
G424418 NA non-coding downstream 141404 9977259 ~ 9977486 (-)
G424239 NA non-coding downstream 278363 9840107 ~ 9840527 (-)
G424496 NA non-coding upstream 39815 10159648 ~ 10160361 (-)
G424504 NA non-coding upstream 53766 10173599 ~ 10174147 (-)
G424535 NA non-coding upstream 132388 10252221 ~ 10252462 (-)
G424797 NA non-coding upstream 142238 10262071 ~ 10262340 (-)
G424823 NA non-coding upstream 152090 10271923 ~ 10272411 (-)
CI01000304_09737662_09738777 NA other downstream 379419 9736746 ~ 9738777 (-)
CI01000304_09566730_09575706 NA other downstream 549856 9566730 ~ 9575706 (-)
G423386 NA other downstream 1253594 8862223 ~ 8865296 (-)
G422810 NA other downstream 2466187 7630159 ~ 7652703 (-)
G422378 NA other downstream 3335844 6744679 ~ 6783046 (-)
CI01000304_10191594_10192287 RNASEKB, RNASEK other upstream 70741 10190574 ~ 10192357 (-)
G424808 NA other upstream 324522 10444355 ~ 10542665 (-)
CI01000304_11338304_11348212 ILK other upstream 1227187 11338019 ~ 11348212 (-)
G425580 NA other upstream 1748844 11868677 ~ 11872906 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location