G438170


Basic Information

Item Value
gene id G438170
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000308
NCBI id null
chromosome length 1982671
location 1733404 ~ 1734202 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU502914
TTTAAAACCTTTATTTGAATATAGCAACATTTTTATTAAACAAATCTTTTTGAATAGGGCAACATTTGTATTTTAAAACCTTTATTTTAATATGGAAACATGATACCTCATTCTGCAATATTTCTATGATTAAATAGCAAGAGCAACGCAAATTAGCGTCTGGTTTAAGACATGCTTTTTGGGGGGTGGTAAATAATGACGCAAATACCAGTAAATTGACTAGAGCAAACCTTAGTAAATCACCTTGCGTGATTCATTTAAATACTCTCCTCCCATAAATTTTGCATCTAAAAGAGAAACTCCTACAAATGCATATGCAATAAGGTCAGCCTAAACAATAACTGTGTCCACGCCTTTTCAGCACTAATTTTTCACTGCATGTCTTTAGTAAATTCTAACAGTAGTTTTTAACACCAAAAGAGGGTTTGAACTGGCACAAGCCGTTAGTAAATCTGGCCCAATAAAAGTGTTTGTGATTGTAATTTCTTAACAGTGTCCCTTTGGTGTGTTACAATCTCACTTTTTGCATCCAGATTCTTTGGTTAAAGTCACCATGAAATCAAAATTGACAATTCTTGTTTTTTTATGGAATATTGCAGCATATAAATTCCCCTCCTTCTTGCAGTGACATCTCTTCACTTCTCTGATGACGTGTTTACTGGCACGAGGGCGGGACAACCTGTCACTCACATGAGATCGTCCAATAGCAAACCACAACCATCCAGCATCCAATTAATTCCCCATGGACAAAGTCATGTCCTGCCCTACATTGTTTTCTTGTTCGACAAGCCGTTTCACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU502914 True 799 lncRNA 0.36 1 1733404 1734202

Neighbor

gene id symbol gene type direction distance location
CI01000308_01667660_01683460 MIPEP coding upstream 49806 1667660 ~ 1683598 (+)
CI01000308_01645574_01648364 CADM2 coding upstream 84837 1644246 ~ 1648567 (+)
CI01000308_01594565_01626825 CADM2, CADM2B coding upstream 106579 1594565 ~ 1626825 (+)
CI01000308_01132580_01134190 FKRP coding upstream 598990 1132025 ~ 1134414 (+)
CI01000308_01003736_01006059 NA coding upstream 726287 1003736 ~ 1007117 (+)
CI01000308_01751621_01754826 NA coding downstream 17339 1751541 ~ 1755020 (+)
CI01000308_01757068_01765055 NA coding downstream 21668 1755870 ~ 1766109 (+)
CI01000308_01775458_01781291 NA coding downstream 41210 1775412 ~ 1781291 (+)
CI01000308_01829826_01849607 NUMBL coding downstream 95624 1829826 ~ 1850544 (+)
CI01000308_01855056_01857722 NA coding downstream 120521 1854723 ~ 1859663 (+)
G438036 NA non-coding upstream 191539 1534018 ~ 1541865 (+)
G438032 NA non-coding upstream 199616 1421020 ~ 1533788 (+)
G438033 NA non-coding upstream 269974 1443373 ~ 1463430 (+)
G438100 NA non-coding upstream 320294 1412751 ~ 1413110 (+)
G438174 NA non-coding downstream 7357 1741559 ~ 1741931 (+)
G438125 NA non-coding downstream 56265 1790467 ~ 1798846 (+)
G438130 NA non-coding downstream 87113 1821315 ~ 1857127 (+)

Expression


Co-expression Network