CI01000310_00861939_01046631 (KLHL29)


Basic Information

Item Value
gene id CI01000310_00861939_01046631
gene name KLHL29
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 861939 ~ 1046631 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000310_00861939_01046631.mRNA
ATGATGTCACGGTACCATCAGCATTTTGAGCGGGATTTCCGCGGTGTGTGGGAGAGGAGGGAGCGATGTGCCACCAACAGCAGCTGCAGCGGCACTGTTAACGACTGTGTCTCCACATCTGCCTCCTCCGTTCCCAACAGCGGCAACAACCGTCCCGGCCTCCTCCCCCTGCCCATCATCCCCTCGCTGCTGCCCACTCCAGTCTCCGGGACAACCAGCACATCCAATAGTGAGCTGACCTGCAAGCGATTAGCTCCCACCTGTACAACCTCCACTACTAAGGTCTCTGGGCACCCGTCGGCAGACACGCAGACTCAGGGCCAGGTCCTGGCTAATAGTGTCCGGTGGGGACAAACACTCATTAACCAATCCACGCCCTGGGACACGGACGAGCCGCCGGCAAAACAGATGAGGGAGAAAGATATCACAGCTCCTCTATGGCCGCCACAAGTTGCTGCCTCCGTCAGCCAGGCTGGACTCTTGACGCACACGTACGCCTTGCCGCAGGCACCAGCTTACAGCCAGTGTGCGACCATCCAAGCGCCCATCGTCGGCGTGACCCCAGCGCTCCAGACTCCTCACCCGCAATTACCTGCACACTACCAGCTCCCACAGCAGCCTTCACAGCCGATGACCAGCATGGTCCTCAACATCCAGAGCCAATCCCTCGCTGTCGGCGGCCTGCCCCCAATGCCCAGCATCTGCCAGGTTGCCCATCCTGTCCACACGGTGGTGGGCAACGGTCACCTGACCCACCCCATGGTGCAGTCCGCCGCCATGACCTCCTCAACGCTGCCCACCAATGGACCTTTGACGAATGGCCAACAGGAGACCACCAACAATGGCCTGCAGATGCTGAGAACGGTCGGACTGGGGAAATATGAATTTACAGACCCCTGGCATCCCAAAGAAATGTTGAAGGAATTGAACCAGCAGCGGAGAGAGAAAGAGTTTACAGACCTGAAAATAATTGTTGAAGGCAAAGAGTTTGAAGTCCATCAAAATGTTCTAGCTTCCTGCAGCTTGTATTTCAAGGACATGGTGAAAAGGTTATCGGGAGAGAACAGAAACGGTGAGAAGATGCAGCTGACAATGAGCAACATCAGTTCAGATGTTTTGGAGCTTCTCTTGGAGTTTGTTTACACCGGCTCCCTCATTATTGACTCGGCCAACGCCAAGACCTTACTGGAGGCGGCCAACAAGTTTCAGTTCAACACATTCTGCAAAGTCTGTGTCTCCTTCCTCGAGAAACAGCTGACGGCCAGTAACTGTCTGGGAGTGTTGGCCATGGCCGAGGCGATGCAGTGCACCGAGCTCCACAACATGGCAAAAGCCTTCGCCCTGCAAAACTTCCCTGATGTGGCCAGTCAAGATGAAATCCTGAACATTTCCAAAGAAGATCTGGTTAGTTACATGTCCAACGACAGCCTAAACACGAAAGCTGAGGAGCTGGTCTATGAGACAGTCATCAAATGGATTAAAAAGGATCCCAGCAGCAGAGTCCAGCATGTGTCTGAGCTGTTGGCAGTGGTGCGGCTTCCGTTCATTCATCCCAGCTACCTGCTGAACGTGGTGGACAACGAGGAACTGATCAAATCTTCAGAGGCCTGCAGGGACCTGGTGAATGAAGCCAAGCGCTACCACATGCTGCCACATGCCCGCCAAGACATGCAGACGCCCAGAACTCGCCCGCGACTGTCTGCCGGTGTCGCTGAGGTGATCGTGCTGGTGGGTGGGCGGCAGGTCATCGGTATGAACCAGCGTTCGCTGACAGCCGTCACTTGCTTCAACCCTCAGAACAACAAGTGGTACCCCCTGGCCAGCTTGCCTTTCTACAACCGCGAGTTCTTCTCCGTCATATCGGCGGGGGATAATATCTACCTGTCAGGTGGCATTGAGTCGGGAGTCACGCTGGCAGACGTGTGGTGTTACATGTCCCTGCTGGATAATTGGAATCTTGTGTCTCGGATGACATTCCCGCGGTGCCGGCACAACAGCGTGGTTTATGACGGCAAGCTTTACGCCATCGGAGGCCTCGGAGTGGCCGGAAACCTGGATAATGTGGAAAGATACGACACCATCACTAACCAGTGGGAGATGGTGGCTTCTTTGCCCAAACCTGTGCATTCTGCAGCAGCGACTGTCTGTGGAGGGAAGATTTATGTGTTTGGAGGGGTGAATGAGGCCGGTCGCTCTGCTGGAGTACTTCAATCATATGTGCCCCAAACCAACGCCTGGAGCTTTATTGAGTCGCCTATGATCGATAACAAATATGCCCCAGCTGTGACTCTTAATGGATATATCTTCATCCTTGGAGGAGCATACGCCAGAGCCACCACCATCTACGACCCCAAGAAAGGAAATATCAAAGCAGGACCCAACATGAACCACTCCAGACAGTTCTGCAGTGCGGTGGTCCTGGATGGGAAGATCTATGCAACCGGTGGCATCGTAAGCAGCGAGGGCCCGGCGCTGGGAACCATGGAGGCCTTCGACCCCTGTGCCAACATGTGGACGCTGCAGCAGAGCCTGCCTTGCCCACTCTTTAGACACGGCTGCGTGGTTATTAAGAAGTACATTCAGAGCGGG

Function

symbol description
klhl29 Orthologous to human KLHL29 (kelch like family member 29).

GO: NA

KEGG:

id description
K10465 KLHL29, KBTBD9; kelch-like protein 29

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000310_00861939_01046631.mRNA True 2589 mRNA 0.55 12 861939 1046631

Neighbor

gene id symbol gene type direction distance location
CI01000310_00784238_00790497 NA coding upstream 70045 784238 ~ 791969 (+)
CI01000310_00744256_00746991 NA coding upstream 114834 743378 ~ 747105 (+)
CI01000310_00738120_00739067 NA coding upstream 122124 737918 ~ 739815 (+)
CI01000310_00721054_00727169 BDKRB1 coding upstream 132627 720837 ~ 729312 (+)
CI01000310_00717405_00718485 BDKRB2 coding upstream 143376 717405 ~ 718563 (+)
CI01000310_01103452_01164843 NA coding downstream 55246 1101821 ~ 1164974 (+)
CI01000310_01196439_01199290 NA coding downstream 149069 1195700 ~ 1199377 (+)
CI01000310_01207513_01226750 CDC5L coding downstream 160426 1207057 ~ 1227194 (+)
CI01000310_01257447_01269508 NA coding downstream 210696 1257327 ~ 1270033 (+)
CI01000310_01394296_01394727 NA coding downstream 346458 1393089 ~ 1394908 (+)
G439289 NA non-coding upstream 67447 792673 ~ 794492 (+)
G439148 NA non-coding upstream 105143 756339 ~ 756796 (+)
G439138 NA non-coding upstream 109260 752270 ~ 752679 (+)
G439141 NA non-coding upstream 112968 703648 ~ 748971 (+)
G439300 NA non-coding downstream 8916 1055547 ~ 1056332 (+)
G439457 NA non-coding downstream 48455 1095086 ~ 1095662 (+)
G439456 NA non-coding downstream 49524 1096155 ~ 1096516 (+)
G439486 NA non-coding downstream 80999 1127630 ~ 1127866 (+)
G439115 NA other upstream 170747 651976 ~ 653356 (+)
CI01000310_00648731_00650082 NAPB other upstream 212386 648566 ~ 650159 (+)
CI01000310_01508712_01511125 FAM167A other downstream 455255 1508341 ~ 1513341 (+)
G439845 NA other downstream 864970 1911601 ~ 1912417 (+)
G440505 NA other downstream 2052786 3099417 ~ 3136328 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_011200 KLHL29 coding NC_007128.7 CM002901.2 4578552 ~ 4854851 (+)