CI01000310_03190691_03191339


Basic Information

Item Value
gene id CI01000310_03190691_03191339
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 3189997 ~ 3191430 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000310_03190691_03191339.mRNA
TAATAAAAACGAGCACAATACATTTATTCTGAAAGGCTTTTTAGAGCGGAAAGTTGTTCACGACTCTGGATTATTCCTGACAGTCCAAACAGGTGGGCTACGACAGAGATGAATCCAGCTCACTGGGGCAAACGGTCACATCCTTTGACCTACATTTCTACACTCTCATTTGGTTATTGGACTAGATTTTGGTTATTAACATTTGCTTAAAAAAAAAAGAGCATCATGTCCTAGATTTCCCTGACAAATTTGTACTATGGTGGTAACATGGTACAGTGATGTTATGAAGATGGTAATGGTATTGAATGATTCCCATACATACAGAATTTACAGTCAAAGAATACCAGGGTATTACCATGGCACATGTCCAAAAAAAACATGGTATTAACATCATACAAGTACAACAACTATGGTAATTGCTGCTTTTATCTTACATTTAGCTGTACTTTTTGTGCCCTTCATTTTGTCAAAACAACAAACATTTAAAAGTTCACAACAATAGGCCTATTGGTTGTAGGTTCAATGTTTTGAAGGGTCAGAATCTGTCAGATTGGATAGTGAGCTGTCAAAATGCTGGACGCAATACTGAAGCCGCAATAATGCTATCTATAGGCAGTAGGTTTTGAAACATACCTCTTATTACACGACAGGAAACCTGGCTATAACGGTGAGAAGAGTTTTTCTATAACGGGCGATGAAAATGGAATGCGAGAAGCATTTCCGCCGCTACAATGTATCAAGTTCAAATGTATACAGCTCAAATGTATCCAGTACAAACTCTGCGCTGATACACTGTAAACACTCTCGGCTCGCTTCGGAATTCCACACCAAGGTGTCGATTTTACCCGAACTATCACAACACCATAAAAGAGCTCTAGTGTTTGTATCTGCACTAAATAAAGGCCCTTACCTGTTTTCCCCCTTCACACTTCAGTTTGCAAACACTACCGTTCCAGAGTTCGCCCTTCTGCAAACCGAACGTCTGTCCTACCGAAACCCAATCCGATCGGGTCCAAATCCAGCTCAGCACCGACAATCTACCAAGACAGCAGAGCGATTCTGCGGCCGAACACCCATGTTATTTCTCTCCCTTCCTCTGAAACCCCAAACACCACCGCGATCTTCGGATCAAAGCAGATTTTAGAGGGTTTTAAACACCGGAATTCCCATATCTGTTGCCGTTGTAATACTAACTGGCTCTAATGGCGGCGGTACAGGAGCGGGGGTAAACCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000310_03190691_03191339.mRNA True 1235 mRNA 0.42 2 3189997 3191430

Neighbor

gene id symbol gene type direction distance location
CI01000310_03165171_03170431 PSMC1B, PSMC1, PSMC1A, PSMC1.L coding upstream 19566 3164937 ~ 3170431 (+)
CI01000310_03069663_03095555 TONSL coding upstream 94109 3069535 ~ 3095888 (+)
CI01000310_03054431_03066827 EDRF1 coding upstream 122613 3054431 ~ 3067384 (+)
CI01000310_02876181_02939106 CDC42BPA coding upstream 250891 2876181 ~ 2939106 (+)
CI01000310_02861303_02864477 NA coding upstream 324940 2860575 ~ 2865057 (+)
CI01000310_03211078_03340983 AKAP6 coding downstream 19648 3211078 ~ 3341448 (+)
CI01000310_03481652_03682190 NPAS3 coding downstream 290222 3481652 ~ 3682190 (+)
CI01000310_03770003_03773402 SRP54.S, SRP54, FAM177A1, SRP54A, SRP54B, SRP54C coding downstream 578002 3769432 ~ 3773402 (+)
CI01000310_03776732_03801282 SEC23A coding downstream 585302 3776732 ~ 3801282 (+)
CI01000310_03868160_03869179 NA coding downstream 674274 3865704 ~ 3869906 (+)
G440546 NA non-coding upstream 12606 3146234 ~ 3177391 (+)
G440533 NA non-coding upstream 91509 3095991 ~ 3098488 (+)
G440623 NA non-coding upstream 140209 3049510 ~ 3049788 (+)
G440483 NA non-coding upstream 334409 2854996 ~ 2855588 (+)
G440477 NA non-coding upstream 342449 2845923 ~ 2847548 (+)
G440659 NA non-coding downstream 1257 3192687 ~ 3192887 (+)
G440672 NA non-coding downstream 165394 3356824 ~ 3357153 (+)
G440566 NA non-coding downstream 174303 3365733 ~ 3369343 (+)
G440550 NA non-coding downstream 178555 3369985 ~ 3375732 (+)
G440553 NA non-coding downstream 186229 3377659 ~ 3384289 (+)
G440505 NA other upstream 53669 3099417 ~ 3136328 (+)
G439845 NA other upstream 1277580 1911601 ~ 1912417 (+)
CI01000310_01508712_01511125 FAM167A other upstream 1676656 1508341 ~ 1513341 (+)
CI01000310_01207513_01226750 CDC5L other upstream 1950592 1207057 ~ 1227194 (+)
G439115 NA other upstream 2498805 651976 ~ 653356 (+)

Expression


Co-expression Network