G439135


Basic Information

Item Value
gene id G439135
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 699615 ~ 699921 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU504010
ACTCTTTCTCTCTTCTCATCTTAATTTCAGTGTGTATATAGAAACACACATGTTGACTTCAGTCTAAATGAGACAAACCACATCACACCATATAAATACTAATATATAGAAGGTGCACAGTGACATTCACACAAATACAAATTGACAGTCTTTTACCAACAAAATGATAATAAAATATTTTTCTTGTCCAAACTGAAATGTAACCAACAAACTGATTCGAAATGTTCAAAAGCATTTATGTATTTATATATTTTTAAACAAAGCACAAAATGTGATGCTCCATCAAGTTTCAATAAATAAAAGATGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU504010 True 307 lncRNA 0.29 1 699615 699921

Neighbor

gene id symbol gene type direction distance location
CI01000310_00691123_00696889 NA coding upstream 2334 691123 ~ 697281 (+)
CI01000310_00653504_00679039 NA coding upstream 20576 653504 ~ 679039 (+)
CI01000310_00648731_00650082 NAPB coding upstream 49496 648566 ~ 650159 (+)
CI01000310_00629492_00629967 NA coding upstream 68783 629492 ~ 630832 (+)
CI01000310_00513998_00524767 HAO1 coding upstream 174009 513998 ~ 525606 (+)
CI01000310_00717405_00718485 BDKRB2 coding downstream 17484 717405 ~ 718563 (+)
CI01000310_00721054_00727169 BDKRB1 coding downstream 20916 720837 ~ 729312 (+)
CI01000310_00738120_00739067 NA coding downstream 37997 737918 ~ 739815 (+)
CI01000310_00744256_00746991 NA coding downstream 43457 743378 ~ 747105 (+)
CI01000310_00784238_00790497 NA coding downstream 84317 784238 ~ 791969 (+)
G439111 NA non-coding upstream 88874 610436 ~ 610741 (+)
G439072 NA non-coding upstream 199497 498773 ~ 500118 (+)
G439054 NA non-coding upstream 209092 426712 ~ 490523 (+)
G439052 NA non-coding upstream 280598 416616 ~ 419017 (+)
CI01000310_00215248_00279025 SNTG2 non-coding upstream 448476 215248 ~ 279648 (+)
G439141 NA non-coding downstream 3727 703648 ~ 748971 (+)
G439134 NA non-coding downstream 15593 715514 ~ 746104 (+)
G439138 NA non-coding downstream 52349 752270 ~ 752679 (+)
G439148 NA non-coding downstream 56418 756339 ~ 756796 (+)
G439115 NA other upstream 8423 651976 ~ 653356 (+)
CI01000310_01207513_01226750 CDC5L other downstream 522085 1207057 ~ 1227194 (+)
CI01000310_01508712_01511125 FAM167A other downstream 801965 1508341 ~ 1513341 (+)
G439845 NA other downstream 1211680 1911601 ~ 1912417 (+)
G440505 NA other downstream 2399496 3099417 ~ 3136328 (+)

Expression


Co-expression Network