G439519


Basic Information

Item Value
gene id G439519
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000310
NCBI id null
chromosome length 5141163
location 1162939 ~ 1163156 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU504513
CACATACTGCATCAATAACAACATCATGGCTGCGTAGAAGGAGGATCCGGGTACTGAAATGGCCAGCCTGCAGTCCAGATCTTTCATCCATAGAAAACATTTGGCGCATCATAAAGAGGAAGATGCGACAAAGAAGACCTAAGACAGTTAAGCAACTAGAAGCCTGTATTAGACAAGAATGGGACAACATTCCTATTCCTAAACTTGAGCAACTTGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU504513 True 218 lncRNA 0.43 1 1162939 1163156

Neighbor

gene id symbol gene type direction distance location
CI01000310_00861939_01046631 KLHL29 coding upstream 116308 861939 ~ 1046631 (+)
CI01000310_00784238_00790497 NA coding upstream 371045 784238 ~ 791969 (+)
CI01000310_00744256_00746991 NA coding upstream 415834 743378 ~ 747105 (+)
CI01000310_00738120_00739067 NA coding upstream 423124 737918 ~ 739815 (+)
CI01000310_00721054_00727169 BDKRB1 coding upstream 433627 720837 ~ 729312 (+)
CI01000310_01196439_01199290 NA coding downstream 32544 1195700 ~ 1199377 (+)
CI01000310_01207513_01226750 CDC5L coding downstream 43901 1207057 ~ 1227194 (+)
CI01000310_01257447_01269508 NA coding downstream 94171 1257327 ~ 1270033 (+)
CI01000310_01394296_01394727 NA coding downstream 229933 1393089 ~ 1394908 (+)
CI01000310_01411744_01412226 NA coding downstream 248588 1411744 ~ 1412467 (+)
CI01000310_01103452_01164843 NA non-coding upstream 1358 1101821 ~ 1164974 (+)
G439511 NA non-coding upstream 7176 1155294 ~ 1155763 (+)
G439507 NA non-coding upstream 11919 1150740 ~ 1151020 (+)
G439505 NA non-coding upstream 13983 1148611 ~ 1148956 (+)
G439486 NA non-coding upstream 35073 1127630 ~ 1127866 (+)
G439541 NA non-coding downstream 34448 1197604 ~ 1198070 (+)
G439565 NA non-coding downstream 98190 1261346 ~ 1261761 (+)
G439628 NA non-coding downstream 194742 1357898 ~ 1367503 (+)
G439631 NA non-coding downstream 202475 1365631 ~ 1366429 (+)
G439657 NA non-coding downstream 244551 1407707 ~ 1410605 (+)
G439115 NA other upstream 471747 651976 ~ 653356 (+)
CI01000310_00648731_00650082 NAPB other upstream 513386 648566 ~ 650159 (+)
CI01000310_01508712_01511125 FAM167A other downstream 338730 1508341 ~ 1513341 (+)
G439845 NA other downstream 748445 1911601 ~ 1912417 (+)
G440505 NA other downstream 1936261 3099417 ~ 3136328 (+)

Expression


Co-expression Network