CI01000323_00121706_00125427


Basic Information

Item Value
gene id CI01000323_00121706_00125427
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000323
NCBI id null
chromosome length 493539
location 120874 ~ 125427 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000323_00121706_00125427.mRNA
CCCCTTTTTGCCCCATCCTGACAAACCTACGGTCCCACAGGGACAAGTGGAAAACGTTGTTTAAAACGTACCTGTTAGCAATGGGCCTCAATGCTGTCCCCACGAAGCAAAAAATGGCCATACTCCTTCACTGTCTTGGTGCCGAAAGACAGCGTGTTTTTCGCATGCTCGGAGATGTGGACGATTACGCTGCTGCAATTACACTGTTAGATCGACACTTGGAAAAAAAAAAAAAACAGCGTCTCCTGCTGAAACAGCTGCATTTCCAACAGCGCAGGCAGCGCGCTGGGACAAACATGTCAACACTGTCAAAAGCTGAACCACTTTGCAAAATGGTGTCGGTCTGCTCCAGTCCAAGTGCTCCAGTCCTACACAGCGAAACCCACGTGCTAACGTATGGCAACAAGGCCCTGCCCAACTTCCCATTTTACATTACACACCATGGCAGCAATATCTTTGGATTGGACCTGTTTATGAGTCTGGACTTTTCTCTGCTGGACAATAAGGGGGCTCAAATTCTGACTGTCAGCTGTCCCTGGCAACAAGAATGGCCAAGGCTGTTTAAAGGCCTTGGGTGCATGGCTGCATTCACTCAACAGCCTCTCTTGGATCCCACAGTTAAACCTGTCATTCAGCCGCTTCACCGCATTCCGCTGGCATTGCGTGAGGAAGTCACGTTAGAACTTGGCAAACTCAGAAATCTTACTGCATTCGTTACGCACATTAGCGTATTTCGTTACACAAGGATGCCTTTTGGACTCAGCTCGGCCCCTAGCTGTTTCCAAAAAATCATGTCCACTATACTGGCTGGTGTCCCTGGCACTGCCATCTACATCGATGATGTCATTGTCCATGTCCCGAATGCAGTGATTCATGAACAGCGCTTAAGGGCCACTTTTGCTGCACTCAGTCAACATAATCTGACACTCAACATTCCACGATCATCTTGTTCTGATGCTGTGCGCACACTTAAGGAACTGTTGACAAGCCCCCCTGTCTTGGCACACTTCAGTCTTGACTGCCCCACACTGGTCACTTGTGATGCTTCAGCTACTGCTGCTGGCGCTGTTCTTTCACAACTTCAGAATGGCATTGAATGGCCTGTGGCTTTTGCTTCTCGTGCATTCAGTTTGACAGAACAAAATTACTCAACTGGAGATAGGGCTCTGGCTTGTGTATGGGCCTGTGAGCGCTGGCATGCCTACCTTTATTGCCGAAAATTCACCCTTCGAACTGACCACCAAGCCCTCTGTGCACTTATGTCTCCTTCTGGGTCTGGCCACAAACTACTGTGCATGTTCTGCTGGACTGACCGTCTCCAGCAGTATGACTTTACAATACAGTACACCTCAGGCAGAGATAATGTGGCTGAGGACAAGGACCTTATTGAATTGGTGCATGCACCCCTAACAGCTTTCGTGTCCTTGGAGGAACTCACCGAGGAGTCAGCAGCTGATGCCACGCTCTCTGTAGTCCATGAGTATGTCCTGAATGGCTGGACAGCTCAAGTTACAACAGATATCCAGCCGTATGCCCGAAGCAGCTCAACATGCCACCACTGGGGTGTCACCAGCAAAACTGATGCTGGGGCAAGAGCTGGAGTTACCCTAGCACATACTTTGCCCTACTACTTCTCACGGTGGAAACCCTGTGGTGAAAGCCAGGGTACGTGGACAACAGCTCAAAGCACAGAGCAGATTCAATGCAAAGAAAAAGGCTTGGATTCCCAGGATCTTCCTATTGGACTGGGTGCGGGTTCAGCGGCCACACCGGAAAAACAAGCTCCACACTTTCTGTTCGCAGCCCCAGCAGATCCCAGCACAACATCCAGTGACTCCGCAAGCAACAACCCTACCAACATCTGCAGCATCACAAGGCAGGCCTACCAGATCACACACTCAGCCTGCTCGCTTTCAGGACTACTTAACGTCCTTTCATACTTAGTTCACCGGGAGGGGAGGGGAAATGTTGCATGTTTAGTTAGACTTATAATCTGATGTTTCATTAGAGTAATGTGTTTTGTTACATTGGTGGGATATAAGGAACGCCGGTCACTTTAAGAGTTCGGAATGAGTAATGACGTTGACACTAGAATTATAGAATGTTTTTCATGCAGTTCAGTGATGTGAGAGAAGTTGACGAGAACAGTAAAAAGTAAAAAGTCCAAGTATGAGTCATCTTTACAGACAGAACAGTTACGTCCTGTGACGTAGTGTGTACTGATTTGGGGGCAGTTATGTGTTTTTGTTTTTCTCTATGTTGTATTTTCTTTTTTCTTTTCTCTTCTGTGCTGCTGCTCTAACAGGAGCTGATTGCTGGCACCTGATACTCGTTTGCTGATAGCCAACTAGCACTTCATTCACTGGCTTTTTCAGTGAGGAAATCAGCTATAAAAGCCATCAAGAAAGCACAGATGGGGAGAGAGGAGAGAAGAGAGACAGAGCCACGTCTTCCTCCACATGGACCTTCTCTGCAGCCCCAGACAATTGTTGCTAGTCGTTTTGTTGTTTAATAACTGATAGTTAGTGCAAATACTGAAATCTGTGATAGAGTTCCTGTTAGTGCTGTTGTTGTGTTCTTAACTAGAGTGTTAATTCCAACTCTCAATGTTGCTGACTCCTTTTACAGTTCTTTATTTATTATTTTGTTAAATTGAATACTTTATTTGTAATTTGTTTGGAGTAGAGTGCCATTTTTGTTTCTCTTGTTATTTCTGTGATAGGTAATTTAGACTTAAAACTGAGTTAGACACTGTTTTGTTTGTTATTTTGCCTATGCCCCCTCCTGAAGCCTTTTTGTGTTCTTATTACTATTTTTTTACACAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000323_00121706_00125427.mRNA True 2829 mRNA 0.46 8 120874 125427

Neighbor

gene id symbol gene type direction distance location
CI01000323_00058863_00066027 WNT3A, WNT3A.L coding downstream 54847 58414 ~ 66027 (-)
CI01000323_00008871_00010120 NA coding downstream 110754 8688 ~ 10120 (-)
CI01000323_00328972_00333383 NA coding upstream 203540 328967 ~ 333547 (-)
CI01000323_00404644_00405142 NA coding upstream 278698 404125 ~ 405142 (-)
CI01000323_00488566_00489842 NA coding upstream 362009 487436 ~ 489842 (-)
G460191 NA non-coding downstream 37713 82887 ~ 83161 (-)
G460069 NA non-coding downstream 79554 41030 ~ 41320 (-)
G460059 NA non-coding downstream 83593 32893 ~ 37281 (-)
G460058 NA non-coding downstream 84777 35730 ~ 36097 (-)
G460042 NA non-coding downstream 92861 17489 ~ 28013 (-)
G460434 NA non-coding upstream 314084 439511 ~ 445902 (-)
G460457 NA non-coding upstream 349444 474871 ~ 475376 (-)
G460455 NA non-coding upstream 350033 475460 ~ 476111 (-)
G460459 NA non-coding upstream 352428 477855 ~ 478215 (-)
G460460 NA non-coding upstream 353690 479117 ~ 479357 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
striped catfish (Pangasianodon hypophthalmus) G71322 NA non-coding NC_047598.1 CM018544.1 26039182 ~ 26039383 (+)