G460200


Basic Information

Item Value
gene id G460200
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000323
NCBI id null
chromosome length 493539
location 95378 ~ 169057 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU528290
GAGTAAATGGCAAATCTTCAAGTGAATTGTGATAATGAGAATGGTGATACTGTCCTTTTTGTTGTAGGCAAGTGGAGCTGGCAGTATGCTGATATCCTGGAGCAGAGATGATGTTGGAGAACACACACGAAGATGGAGTACACAGAGGGAGAACAGGAAGCACGCTGGAGACAGGTAAGTAGTCGACTGGAGTCCTTAAGGTAAGCATTCAGGTAAGATCTAGATGCTAACGAGACCGGACAGTGAGTGTGTGTGTGTGTGAGAGAGTCCTTTATACTGCCGCTGATGAGGGTGATGATGAGGTGCAGGTGTGCATGATCAGTATTCGGGTGAGGGAGTGCGCTGTGATTGGGTGATGGTGGAGCCTGG
>TU528291
GTTACAACACAGATGGTCGGAGACACAGGAAGTATAATATAAGATGTTTATTTCACAACCAGACGAGCAACGGTGAAGCAGGTGAGTAAATGGCAAATCTTCAAGTGAATTGTGATAATGAGAATAGTGATACTGTCCTTTTTGTTGTAGGCAAGTGGAGCTGGCAGTATGCTGATATCCTGGAGCAGAGATGACGTTGGAGAACACACACGAAGACGGAGTACACAAAGGGAGAACAGGAAGCACGCTGGAGACAGGTAAGTAGTCGACTAAAGTCCTTAAGGTAAGCATTCAGGTAAGATCTAGATGCTAACGAGACCGGACAGTGAGTGTGTGTGTGTGTGAGAGAGTCCTTTATACTGCCGCTGATGAGGGTGATGATGAGGTGCAGGTGTGCATGATCAGTATTCGGGTGAGGGAGTGCGCTGTGATTGGGTGATGGTGGAGCCTGG
>TU528289
GAGTAAATGGCAAATCTTCAAGTGAATTGTGATAATGAGAATGGTGATACTGTCCTTTTTGTTGTAGGCAAGTGGAGCTGGCAGTATGCTGATATCCTGGAGCAGAGATGATGTTGGAGAACACACACGAAGATGGAGTACACAGAGGGAGAACAGGAAGCACGCTGGAGACAGGTAAGTAGTCGACTGGAGTCCTTAAGGTAAGCATTCAGGTAAGATCTAGATGCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU528290 False 369 lncRNA 0.49 3 95378 169057
TU528291 False 452 lncRNA 0.47 2 95378 165531
TU528289 True 230 lncRNA 0.44 2 165219 169057

Neighbor

gene id symbol gene type direction distance location
CI01000323_00058863_00066027 WNT3A, WNT3A.L coding downstream 29351 58414 ~ 66027 (-)
CI01000323_00008871_00010120 NA coding downstream 85258 8688 ~ 10120 (-)
CI01000323_00328972_00333383 NA coding upstream 159910 328967 ~ 333547 (-)
CI01000323_00404644_00405142 NA coding upstream 235068 404125 ~ 405142 (-)
CI01000323_00488566_00489842 NA coding upstream 318379 487436 ~ 489842 (-)
G460191 NA non-coding downstream 12217 82887 ~ 83161 (-)
G460069 NA non-coding downstream 54058 41030 ~ 41320 (-)
G460059 NA non-coding downstream 58097 32893 ~ 37281 (-)
G460058 NA non-coding downstream 59281 35730 ~ 36097 (-)
G460042 NA non-coding downstream 67365 17489 ~ 28013 (-)
G460434 NA non-coding upstream 270454 439511 ~ 445902 (-)
G460457 NA non-coding upstream 305814 474871 ~ 475376 (-)
G460455 NA non-coding upstream 306403 475460 ~ 476111 (-)
G460459 NA non-coding upstream 308798 477855 ~ 478215 (-)
G460460 NA non-coding upstream 310060 479117 ~ 479357 (-)

Expression


Co-expression Network