CI01000325_01361587_01367807


Basic Information

Item Value
gene id CI01000325_01361587_01367807
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000325
NCBI id null
chromosome length 10587162
location 1360761 ~ 1367901 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000325_01361587_01367807.mRNA
ATTTAAAAAAAAATGTGAAAGTGGTTTTCCATATGGTTTTGTGTCAAAGAATATGGCCTTGGAGAGATGCTGAGAATCCCTTATTAACTGTAGTGGACTCTGTAATCCCAGTGGAGCATTTATTACAATACACAATCATAAATCAAAGAAGCAACATATGATACATTAATATTATTAAATATTATTTTCTTATTTCATTATTAAAGTAATAGTTAAAAAAAGAGGGGGGAAAATGATGTCATCATGTACTCACTGTCATTTCAAGACTTTCATTTGTGGAACACAAAAGAAGATATTTTGAAGAATGTTTTTGCTGTTTTAGTCCATACAATGAAAGTCACTGGGGTTTAAAACAACATCGGACCCATTGAATTTCACTGTACAAACAAACAAACAAACAAACAAACAAACAAAAAAATACCTACCTACCAACCAACCAAATATCTACTTTTGTGTTCCACAGAAGAAAGGATGACTAATCACTTCATGAATCAAAACTTGCTTGGTAAATTTCAAAAATTAATTGTCAGCTTTGAAAGATTTTATTAGCCCCTTTCATTCTCCCCCAAACAAACTATAAACCAGGGGTGCAAAACTCAGTTCGAGGCCACAGCCCTGGAGAGTTTAGTTCCAACTCTGCTCCAATACACATACCTGTAGTTTTCAAATAAGCCTGAAGAATCACAAGTGTTCAATTAGTGTTGAAGCTAAACTCTCCAGGCCTGTGGCCCTTCAGGAATTGAGTTTTGCACCCCTGAACTAAACAAAAGACTGAAGCGAGGTGAACGAGCATAGTGCAGTACACTGTATCACCTTACAGGAAGTCATGACTAATGGCATCACCACAGTGACTGAGGGTGTGGAAAAAAACATAATCAAAGCTTCAGACTTTGGTGCATGCTGGGTAACGGATTACTTCCAAACGGTCACAGAGGCTCAGGTTTCAAAGCCAAGCCCCACTGATAAACGAGTGGAGGCAGTTGTCACCCAGGCAGGGAGTCCTCCATCAGCAGTGTCTGAAGATGTAACGGGCACTGATAAAACCCTGGATGTTCCCTCAAACATTTCAGGAAATGAAAGTTTGAAACATGATCCGGCTGCGCCAACATCTCCTGCTCCAAGACAAAAGAGGCTCACAAACCTGGCGGATACTGTTCACCTAACAGATGATGGAGGGAAGAATGAAATGAAGGAGAGAGAGGAAAAAGAGAAGGATGCCGGAGAGGTGACTCAGGGAGAAGATCCCCACGGAAGAGGCCGCTTTAGCCTCATTAGCACCTGGTCTCATCTAAAGGACCGTCGGATTCAGTGTGCGGGATGGGGACAGAGATTCAGTGGCTCAGTCTGCATCCGTCGCTCCTCAACCAGAATTACTGGGTTGCATGAGGGTTTAACACACCTTAACCAGGATCTATTTCACACTGCAAGATAAGCTTCAAATTATGGATACAGGAAGAAACTGAAATGAAAGGTATAATGGAGTACCATTCCATTCTTTACAAAAACTGCAAAGAAAAACAGAGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000325_01361587_01367807.mRNA True 1526 mRNA 0.41 5 1360761 1367901

Neighbor

gene id symbol gene type direction distance location
CI01000325_01355950_01357775 MGC130961, SIX1A, SIX1B, SIX1.L, SIX1 coding upstream 2899 1354202 ~ 1357862 (+)
CI01000325_01342491_01349333 SIX4B coding upstream 11157 1342127 ~ 1349604 (+)
CI01000325_01175992_01194875 RHOJ coding upstream 165090 1175992 ~ 1195671 (+)
CI01000325_01041593_01061870 NA coding upstream 298832 1041522 ~ 1061929 (+)
CI01000325_00986217_00993874 CHRNA2B, CHRNA2 coding upstream 366568 986217 ~ 994193 (+)
CI01000325_01458776_01502995 RTN1B coding downstream 90647 1458548 ~ 1502995 (+)
CI01000325_01511071_01519388 NA coding downstream 143074 1510804 ~ 1519594 (+)
CI01000325_01545056_01547234 RD3L coding downstream 177155 1545056 ~ 1547817 (+)
CI01000325_01578092_01612984 PPP1R13BB, PPP1R13B coding downstream 210191 1578092 ~ 1612984 (+)
CI01000325_01662729_01717180 BRF1B, BRF1 coding downstream 294828 1662729 ~ 1717180 (+)
G462160 NA non-coding upstream 77950 1275339 ~ 1282811 (+)
G462208 NA non-coding upstream 97522 1263039 ~ 1263239 (+)
G462206 NA non-coding upstream 103757 1256675 ~ 1257004 (+)
G462204 NA non-coding upstream 106832 1253684 ~ 1253929 (+)
G462203 NA non-coding upstream 107848 1252693 ~ 1252913 (+)
G462686 NA non-coding downstream 68653 1436554 ~ 1440297 (+)
G462810 NA non-coding downstream 113632 1481533 ~ 1482095 (+)
G462811 NA non-coding downstream 114803 1482704 ~ 1483449 (+)
G462812 NA non-coding downstream 116233 1484134 ~ 1484368 (+)
G462813 NA non-coding downstream 117421 1485322 ~ 1485657 (+)
G462730 NA other downstream 249695 1617596 ~ 1620194 (+)
G462778 NA other downstream 460181 1828082 ~ 1896815 (+)
G462928 NA other downstream 632576 2000477 ~ 2000884 (+)
G463566 NA other downstream 1195254 2563155 ~ 2563735 (+)
G463724 NA other downstream 1360305 2728206 ~ 2728450 (+)

Expression


Co-expression Network