CI01000325_10485430_10485761


Basic Information

Item Value
gene id CI01000325_10485430_10485761
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000325
NCBI id null
chromosome length 10587162
location 10485430 ~ 10486161 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000325_10485430_10485761.mRNA
ATGGTCATAGAAATCCATCCTGAAGCATCTTCATGCTTACAAGAAAAGTCAAATGCATCTGATTGTACCAACTTGGAGGATTCACAAGTCACTCATCTGACCTTGAAAGTTGAGGACACATCTGACGATGATGTCGTTTTTGTTGGTGTTTTGCAAGAATCCCAGGCAGAAGTATGTGAGCCGCAGAGTGAAAAAGAAAAACAGAAACTTGACTAATGTAAACTTTGTACCTTAAAAGAGTTGGTTTTGTATGTGCATGTTTTTGTTAATCACATTTAAATTTGTATTTTTTTTTTTTTTTTTACTTGATACCTTAAACAGTATATAGTAGCTACAGTAAGCACTGCTGCTTGTTCATAGAGTAGAGCTGTAGTTTTCACCTTCCATTACTGTTCACTGATTTCTCGTTGCAGATATGAAGGCTGTTTTTTTTTTTTTTTTTTTTCCCCATTTATTACACAGCCTTTCATTGTGTTCCTTTATTGGATTTCTAAAACGGTTTCCAAATTGTACTTTGTCCAAGGATTTTGTTATTTGTTCAGATGCTCTTAAAAGTTTACATTTGTGGTGAAAAAGCAATTTGCTGCATTGTGGTAACTGGTTGAATTTTTCTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000325_10485430_10485761.mRNA True 616 mRNA 0.34 2 10485430 10486161

Neighbor

gene id symbol gene type direction distance location
CI01000325_10476131_10483412 NA coding upstream 1962 10475815 ~ 10483468 (+)
CI01000325_10471174_10473656 SF3B6.S, BRAFLDRAFT_273506, PM14, SF3B6 coding upstream 11586 10471174 ~ 10473844 (+)
CI01000325_10442850_10467979 VSNL1.L, VSNL1B, VSNL1, HPCAL4, VSNL1A, VISL1, VSNL1.S coding upstream 17451 10442850 ~ 10467979 (+)
CI01000325_10370275_10385142 NA coding upstream 99139 10370045 ~ 10386291 (+)
CI01000325_10348845_10351323 FBXO16 coding upstream 134002 10348845 ~ 10351428 (+)
CI01000325_10503217_10508050 MEP1A.1 coding downstream 17056 10503217 ~ 10508201 (+)
CI01000325_10508690_10513563 MEP1A.2 coding downstream 22529 10508690 ~ 10513590 (+)
G468400 NA non-coding upstream 81974 10403192 ~ 10403456 (+)
G468377 NA non-coding upstream 249265 10233385 ~ 10236165 (+)
G468354 NA non-coding upstream 263209 10221991 ~ 10222221 (+)
G468349 NA non-coding upstream 276738 10207072 ~ 10208692 (+)
G468348 NA non-coding upstream 288400 10195365 ~ 10197030 (+)
G468440 NA non-coding downstream 32063 10518224 ~ 10518552 (+)
G468453 NA non-coding downstream 86599 10572760 ~ 10573192 (+)
CI01000325_08732866_08734588 NA other upstream 1750878 8732514 ~ 8734758 (+)
G466752 NA other upstream 1910220 8574116 ~ 8575210 (+)
G466219 NA other upstream 2999023 7482036 ~ 7486407 (+)
G466227 NA other upstream 3170618 7312083 ~ 7314812 (+)
G466236 NA other upstream 3480775 7003617 ~ 7004655 (+)

Expression


Co-expression Network