G468400


Basic Information

Item Value
gene id G468400
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000325
NCBI id null
chromosome length 10587162
location 10403192 ~ 10403456 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU537629
GTGTATTTAACCGTTCAAGCCCAATTAGGCGTCAAAAAGCACTCAGTTCAGTCCTCACGCGCTCTATGAGCAGCGGCTTCCTGTCGCGCGTCTCTCAGACGGTGCTGAGAAACAGTCTCAGAGAGCGCGTGCATATGCTGAAATGAGTTTTCTTTCGCTGCTAATTGCACTTAAATGGTTTAAAACCACTTGTTTTTAAACCGGAATGCTTAAAAGCTCATGCAAATTAGAAACTTTAGTGACCGCGAAGCATAGCAACCTCACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU537629 True 265 lncRNA 0.46 1 10403192 10403456

Neighbor

gene id symbol gene type direction distance location
CI01000325_10370275_10385142 NA coding upstream 16901 10370045 ~ 10386291 (+)
CI01000325_10348845_10351323 FBXO16 coding upstream 51764 10348845 ~ 10351428 (+)
CI01000325_10266709_10324239 CDC42BPA coding upstream 78939 10265602 ~ 10324253 (+)
CI01000325_10256815_10257312 NA coding upstream 145306 10256815 ~ 10257886 (+)
CI01000325_10250179_10252706 NA coding upstream 150039 10249367 ~ 10253153 (+)
CI01000325_10442850_10467979 VSNL1.L, VSNL1B, VSNL1, HPCAL4, VSNL1A, VISL1, VSNL1.S coding downstream 39394 10442850 ~ 10467979 (+)
CI01000325_10471174_10473656 SF3B6.S, BRAFLDRAFT_273506, PM14, SF3B6 coding downstream 67718 10471174 ~ 10473844 (+)
CI01000325_10476131_10483412 NA coding downstream 72359 10475815 ~ 10483468 (+)
CI01000325_10485430_10485761 NA coding downstream 81974 10485430 ~ 10486161 (+)
CI01000325_10503217_10508050 MEP1A.1 coding downstream 99761 10503217 ~ 10508201 (+)
G468377 NA non-coding upstream 167027 10233385 ~ 10236165 (+)
G468354 NA non-coding upstream 180971 10221991 ~ 10222221 (+)
G468349 NA non-coding upstream 194500 10207072 ~ 10208692 (+)
G468348 NA non-coding upstream 206162 10195365 ~ 10197030 (+)
CI01000325_10127601_10139309 EMILIN1A non-coding upstream 268851 10127251 ~ 10140885 (+)
G468440 NA non-coding downstream 114768 10518224 ~ 10518552 (+)
G468453 NA non-coding downstream 169304 10572760 ~ 10573192 (+)
CI01000325_08732866_08734588 NA other upstream 1668640 8732514 ~ 8734758 (+)
G466752 NA other upstream 1827982 8574116 ~ 8575210 (+)
G466219 NA other upstream 2916785 7482036 ~ 7486407 (+)
G466227 NA other upstream 3088380 7312083 ~ 7314812 (+)
G466236 NA other upstream 3398537 7003617 ~ 7004655 (+)

Expression


Co-expression Network