G468861


Basic Information

Item Value
gene id G468861
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000325
NCBI id null
chromosome length 10587162
location 10415135 ~ 10437849 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU538138
GATGAAATAATATTCATTCATGGGTGAACTATCCCTTTAAATTTAGACACCCACCAGTCTAAGCAGTCTAAATTTGTGGTTACTTTCCATAAACTCTCCAGAGGGTTGTTTCCATGTGGCACAACGATCAGAAATAACTACAGACATTGCAAACTCAGTAATAATTTCCAAATCCTACTGTTCAGTCTTTTTAAGAGCACTCTAGCGACTAGTTTTATGAGCAGGCATGAGAATCTTTTGTCTCAGGGTTGTAAAAATTGTCCTTGTTGCAGTGTCAAAACTAGACTCACTTCATTTTCAAAAGCTTTAAAGACCAATTTAAACTTTTAGCATTTAATTTGCCCAGTATAAATAATAAGAAGATGCAAAAATGAGATATTGCTACTTGTTGCATCATTATAGGTGAATTCTGAACAATAAGGTCCATCTGTACATGAAGCTCTGATCTACTGATGCTGTTGAAAAGAATTGGTCACTGCAGGCTATAAAAGGAACCGAAGAGCCTGTCTACCTCAAAAGCAATAGTCCACTCCATTTTCCATTTAGGCTGCATCAGTGCTATTTCTGCTGCAACAGGAGACCAGAGAGAATACTCTGTCCCCTGTGACTATAACACGCAGGTTGAATCGATCTTTTAAAATGATTTTGCCTTTTCACGCGACACTGCTGTAATGCAGATAGATTAAAATGATCTTTGCCATACACAAAGACTAGCAGCGGTGCATTCATAGTAGTAGCAACGAGGTAGAACACAAGCCATATTCTGATCTGATTTAAAATAGTGCTGTGTATATGTTGAGCTCATCTTATGTTCGTACGACAGAAAATGCTGTGTTATGAATGATCAACACAGCGATGTTGTACAAGCACTCGTGTCACCTAAGAACTGACTAGCAGGCATTATGATGACTATGCAAACTGAGACCTGTCCAGAGATCAAAAGGCGTTTTAAACCCTGAGTCGAGTCATCACAACTGAGTTGACATCCACACAAGCCTGACAAATTTTGTCACATGTGAATTTAGCTAGCCAAGTGATTTAGCACATCCAGCTTATTCGGAAAGTCACATTATACAACAAACATTTAGATCAATTCATTACTTTACAGCATGACCTTGAGACTGTAAAATTATGGGTGGTTGATATAGAAAATACATGCTTAGAATTTCACTATGCTTTTATTTCTGCTCTTGTACATTATAGCTGCATTGATCCTGCAGTGTATAAGAAGCTGTGTTAGTAGTGAAGAAAGTCGATTTAAGTCATTTTTGAAATCTGAACTATAAATACAGCAACAACACAGCATTATGACATCCCCCCAGTCCAAAAATCCTAAAGTTGGAATTTCATAATCATAACTTGGAATCAAATCTAGCCTAAGTCACGTCAATGGGAATCCATCATAACACAAAACAAAAACTTGATATTTTAGAACAAATAGTAGCCTATAGGACAATTATGATTACCAAAAGGATAAACTGCCCCGTAGAATAATAAAAATTAATTTAAAATTAATTTTCAGAAATTTTCCTTTGGCTTTGGGTTTTCTTTAACTCTCTCACCAAGGCTCTTCTCCCCCGATAGCTCAGTTTGGCCGGACGGCCAGCTCTAGGAAGGGTTCTGGTCGTCCCAAATGTCTTCCATTTAAGGATTATGGAGGCCACTGTGCTCTTAGGAACCTTAAGTGCAGCAGAAATTTTTTTGTAACCTTGGCCAGATCTGTGCCTTTCCACAATTCTGTCTCTGAGCTCTTCAGGCAGTTCCTTTGACCTCATGATTCTCATTTGCTCTGACATGCACTGTGAGCTGTAAGGTCTTATTTAGACAGGTGTGTGGCTTTCCTAATCAAGTCCAATCAGTATAATCAAACACAGCTGGACTCAAATGAAGGTGTAGGACCATCTCAAGGATGATCAGAAGAAATGGACAGCACCTGAGTTAAATATATGAGTGTCACAGCAAAGGGTCTGAATACTTAGGACCATGTGATATTTCGGTTTTTCTTTTTTAATAAATCTGCAAAAATGTCAACAATTCTGTGTTTTTCTGTCAATATGGGGTGCTGTTTGTACATTAATGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU538138 True 2082 lncRNA 0.38 2 10415135 10437849

Neighbor

gene id symbol gene type direction distance location
CI01000325_10330659_10345549 FZD3A, FZD3 coding downstream 69586 10330659 ~ 10345549 (-)
CI01000325_10259809_10261986 LFT1 coding downstream 153149 10259473 ~ 10261986 (-)
CI01000325_10223671_10247196 KIF26BB coding downstream 167603 10222845 ~ 10247532 (-)
CI01000325_10200118_10220665 SCCPDHB coding downstream 193884 10199979 ~ 10221251 (-)
CI01000325_10092490_10094515 STMN4 coding downstream 320620 10092414 ~ 10094515 (-)
CI01000325_10486953_10491074 PLA2G7 coding upstream 48427 10486276 ~ 10491074 (-)
G468718 NA non-coding downstream 26983 10386043 ~ 10388152 (-)
G468829 NA non-coding downstream 59100 10353364 ~ 10356035 (-)
G468828 NA non-coding downstream 62839 10351998 ~ 10352296 (-)
G468711 NA non-coding downstream 107286 10306459 ~ 10307849 (-)
G468710 NA non-coding downstream 112402 10292050 ~ 10302733 (-)
G468885 NA non-coding upstream 22737 10460586 ~ 10463677 (-)
G468850 NA non-coding upstream 34884 10472733 ~ 10473902 (-)
G468905 NA non-coding upstream 64420 10502269 ~ 10506615 (-)
G468823 NA other downstream 98450 10316130 ~ 10316685 (-)
G468702 NA other downstream 222793 10023665 ~ 10193979 (-)
CI01000325_09286047_09286556 ERH.L, ERH, ERH.S other downstream 1127811 9285532 ~ 9286556 (-)
G467741 NA other downstream 1717552 8679172 ~ 8697583 (-)
CI01000325_08571807_08594165 NA other downstream 1843657 8568722 ~ 8594736 (-)

Expression


Co-expression Network