CI01000339_02926088_02926877


Basic Information

Item Value
gene id CI01000339_02926088_02926877
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000339
NCBI id null
chromosome length 8057057
location 2925953 ~ 2926999 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000339_02926088_02926877.mRNA
GTACTTAAACATGCGTTTCAACTTCGTTTACGACACAACTGTCGTGAATGCCTCTGCGTACTAAAAAAAGTCTTACCGCTCTTTTGTATAGGCTAAGTTTTAACCTTTTTGAATTTGAAAACTTAGGTCGCACACATGACCAAGCGGAGAGCAGAGAACATTTTGCCTCCCGAAATCCCCATTAAAAGAAGTTTTCGTTCTCTCTCCAACATCGACAAACCTGTCGTAGGTGTGAATGTGGTCCAAAACGCTAAGACATCCTCGTTATTGTCATTCGTTGGACAACACTGCAGGAAAAGACCGAAGTATCTCGAAGACCCACTGGATACCGACAACCTACCGAGAAAAGTGGCTGCAAACAGCGTTGATTCAGTGCTGGCAGATAAGAACGCATGCAAGTCTAGAACATTCGAGGATGCTGGTAGACCTGTCACGCGGCGGTCATCTTGCGCGCTTCAAATGGAGTCAAATAAACAGCCAGACGAAGAAAATAACCTGACTGCAGGAGACAAGTTCTGGCGGGTTCCACTGCCTGAGTTGGATATCTCTCTCTTGGAGTCTGAACCCTCAACTGGGTCTTACACAGCCTCTTTCACCAAAGACTTGGAGGCGATGGAAACCTGAGGAGAGATCGCCAGTGCACAGCGACAGGCTCATTGTTGTTTAGATGTTGTATAGGTATTGCCAAATTACCTGACTGGACACGATGAGATGATTCCCCTCATCTGCACTAGATGAATGTATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000339_02926088_02926877.mRNA True 746 mRNA 0.46 2 2925953 2926999

Neighbor

gene id symbol gene type direction distance location
CI01000339_02922115_02925261 CARNMT1 coding upstream 649 2922115 ~ 2925304 (+)
CI01000339_02906594_02907565 FUT7 coding upstream 18217 2906290 ~ 2907736 (+)
CI01000339_02881178_02904181 NA coding upstream 20880 2879942 ~ 2905073 (+)
CI01000339_02827191_02829073 NA coding upstream 96695 2827191 ~ 2829258 (+)
CI01000339_02821530_02821886 MRPL41 coding upstream 103977 2820576 ~ 2823479 (+)
CI01000339_02930318_02952950 TRPM6 coding downstream 3319 2930318 ~ 2954199 (+)
CI01000339_03088452_03091633 NA coding downstream 161111 3088110 ~ 3091633 (+)
CI01000339_03092627_03099083 NA coding downstream 165628 3092627 ~ 3099210 (+)
CI01000339_03140715_03144128 ZFAND5A coding downstream 213538 3140537 ~ 3145379 (+)
CI01000339_03174100_03188909 ABHD17B.S, ABHD17B, F108B coding downstream 247101 3174100 ~ 3189475 (+)
G482035 NA non-coding upstream 24018 2901666 ~ 2901935 (+)
G482004 NA non-coding upstream 85285 2839855 ~ 2840668 (+)
G481898 NA non-coding upstream 206019 2717750 ~ 2719934 (+)
G481899 NA non-coding upstream 273631 2644800 ~ 2652322 (+)
G481855 NA non-coding upstream 370844 2552923 ~ 2555109 (+)
G482048 NA non-coding downstream 22623 2949622 ~ 2950082 (+)
G482069 NA non-coding downstream 153394 3080393 ~ 3083969 (+)
G482139 NA non-coding downstream 157168 3084167 ~ 3084374 (+)
G482192 NA non-coding downstream 202652 3129651 ~ 3130283 (+)
CI01000339_02196706_02198050 GABARAPL1, GABARAP.L, GABARAP, GABARAPA, GABARAPB, BRAFLDRAFT_122660, GBRAP other upstream 727144 2196307 ~ 2198809 (+)
CI01000339_01571624_01576903 NA other upstream 1348250 1571624 ~ 1577706 (+)
G481321 NA other upstream 1635220 1289321 ~ 1290733 (+)
G480761 NA other upstream 2285576 634414 ~ 643423 (+)
G483672 NA other downstream 2300324 5227323 ~ 5239784 (+)
CI01000339_05599544_05600935 TIMM8B.S, TIMM8B other downstream 2673462 5599544 ~ 5602261 (+)
CI01000339_06041909_06043927 ATP5L other downstream 3114818 6041817 ~ 6044034 (+)
G484139 NA other downstream 4019387 6946386 ~ 6966146 (+)

Expression


Co-expression Network