CI01000339_03088452_03091633


Basic Information

Item Value
gene id CI01000339_03088452_03091633
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000339
NCBI id null
chromosome length 8057057
location 3088110 ~ 3091633 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000339_03088452_03091633.mRNA
GTTTATATAACCTGTACTTTCATTAGATGACAAGGTCATTCACACCCTTACTGCTTAATCCTGGTTAACCAGTGGTATAGTAAAATGCTATGAAAGTTTACAATTTTTGACATCAAAGATACACTGGGGGATGCTTTTACTGTTGTATTGAATATACAGTATATTCAAACAGATAGTTCTTAAAAATATATGTTTTGCTCAGTTTGCATGTTTGTGAAGGAATCAGGCTGGTACAGTCAATTCAAACAGTAACAAGCAAACAGTGTAGTGATTTAATGTTTCATTGTGACAGGTTCTTTGTACCATTTCTAAACAAAACAGAGATACGAGCGCTCTGGCATCATGTATGTCAATTCTGGAGCAGAAAATGTGTCCATGTCTTTGAACTTCATGGGCAGGAAGTTACGTAATCACACTGTTGCCCCAGCAGCCAAACAACGTGCCTGGGAGACCACTGACCTTTCTCGATATCAGGATGATCCGGTGGTCTCCACCCGAGTGGTACTTTCACATCCCGTGTCATCAGAGGAACTGCCAGGCAGTGTGCCTGATCTGAGAGAAGAGGTTCAGTGGCGTAGACCGTGTAACATCCATAATACGCTCATAGACCAGGATAAAGATAGAGGTGCAGCTAAATGTGAGTTCTCATGGCTGAGGAAAGGTAGACTCAAATGGAACACATTCAGGCGCTGGATCGGCACAGACCGGCACCGTGATCCAAAGCGAGGTAGCAAAGCACCCAATGTGTCTTCTATGAGTGCAAGCGTAAGACATCCTGAAGATGAGACTCCAATGGATGTCAAGATGTTTATCCCATACGACTCTGCCAAGCTATGCATAACCCAAGTTCTACTGAGAGCAAGGCCCTTTCATAACTACACATTAAACAACTCAAACCCCATAATTCATATAGATTCTCAAAAGATAACAGATGATATGATCGCAATGAAGAGCAGACATCAGGAGATGATTCAAGAACTGGAGGAGAACTTTCTCATTGCATCACGAGAGAATCAGGAAAAAACAGCCCTCAAAATAAAAAGGTATTACCAAAATAAACTTAACACCCTGAAGAGAATCCTAGATATTTACCAGCAAAAGGTGGCCAGAAAAAACGCATACTGGGAAGAGAAGGTCAAGACTCTGGAGGATCTAAATGAAATACTTCAGGGGCAACACAAACTGCTTCAGGAGAAGAACCAAAAAGACTTGGCTTCATGGGATAAAGAAAAG

Function

NR:

description
kif5b-like protein long isoform, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000339_03088452_03091633.mRNA False 1233 mRNA 0.42 8 3088110 3091633

Neighbor

gene id symbol gene type direction distance location
CI01000339_02930318_02952950 TRPM6 coding upstream 133911 2930318 ~ 2954199 (+)
CI01000339_02926088_02926877 NA coding upstream 161111 2925953 ~ 2926999 (+)
CI01000339_02922115_02925261 CARNMT1 coding upstream 162806 2922115 ~ 2925304 (+)
CI01000339_02906594_02907565 FUT7 coding upstream 180374 2906290 ~ 2907736 (+)
CI01000339_02881178_02904181 NA coding upstream 183037 2879942 ~ 2905073 (+)
CI01000339_03092627_03099083 NA coding downstream 994 3092627 ~ 3099210 (+)
CI01000339_03140715_03144128 ZFAND5A coding downstream 48904 3140537 ~ 3145379 (+)
CI01000339_03174100_03188909 ABHD17B.S, ABHD17B, F108B coding downstream 82467 3174100 ~ 3189475 (+)
CI01000339_03192684_03218127 TMEM2 coding downstream 101051 3192684 ~ 3218667 (+)
CI01000339_03310580_03370796 TRPM3 coding downstream 218312 3309945 ~ 3371103 (+)
G482139 NA non-coding upstream 3736 3084167 ~ 3084374 (+)
G482069 NA non-coding upstream 4141 3080393 ~ 3083969 (+)
G482048 NA non-coding upstream 138028 2949622 ~ 2950082 (+)
G482035 NA non-coding upstream 186175 2901666 ~ 2901935 (+)
G482004 NA non-coding upstream 247442 2839855 ~ 2840668 (+)
G482192 NA non-coding downstream 38018 3129651 ~ 3130283 (+)
G482193 NA non-coding downstream 40679 3132312 ~ 3132573 (+)
G482076 NA non-coding downstream 45686 3137319 ~ 3137805 (+)
G482072 NA non-coding downstream 54088 3145721 ~ 3146494 (+)
G482194 NA non-coding downstream 55653 3147286 ~ 3147667 (+)
CI01000339_02821530_02821886 MRPL41 other upstream 264217 2820576 ~ 2823479 (+)
CI01000339_02196706_02198050 GABARAPL1, GABARAP.L, GABARAP, GABARAPA, GABARAPB, BRAFLDRAFT_122660, GBRAP other upstream 889301 2196307 ~ 2198809 (+)
CI01000339_01571624_01576903 NA other upstream 1510407 1571624 ~ 1577706 (+)
G481321 NA other upstream 1797377 1289321 ~ 1290733 (+)
G480761 NA other upstream 2447733 634414 ~ 643423 (+)
G483672 NA other downstream 2135690 5227323 ~ 5239784 (+)
CI01000339_05599544_05600935 TIMM8B.S, TIMM8B other downstream 2508828 5599544 ~ 5602261 (+)
CI01000339_06041909_06043927 ATP5L other downstream 2950184 6041817 ~ 6044034 (+)
G484139 NA other downstream 3854753 6946386 ~ 6966146 (+)
G484134 NA other downstream 3855160 6946793 ~ 6947480 (+)

Expression


Co-expression Network