CI01000339_04449553_04451937


Basic Information

Item Value
gene id CI01000339_04449553_04451937
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000339
NCBI id null
chromosome length 8057057
location 4448977 ~ 4451937 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000339_04449553_04451937.mRNA
ATGTTGAGTGTGGATTCGTTGCCAGTTGCCGAAGAAGAGGTGGTGGAGTCCAGCTCAAACAGACTGGGGGACATTTACACGTTTGTTGCCGAGGGCTGTTATCCTCAAACCATGAACCCTATTCGCAAGAAAAATCTCAAAAGATATGCTCAGAAATTTATGATTGACGATGGACGGTTATATTATGTGGGACCGAAGAAAGAAGAAAAGCGAGAAGTAGTGATTGAGGCAGAGCGAAAGAGACAGATATTCATGGAGTGTCACTTCAATGACATTGGGCATCATCTGGGACAGAAAAAGACCGTTCACAGGATTCAGAGTAAATACTACTGGCTTGGCATTGTCAAGGATGTTGTGGATTGGATTAAAGTATGTGAAACTTGTCAACACACCGAGCGGAATAAAAACTTGGCCAGAACGGTACGACCCATCAAGGTGGATGGTCCGTGGGACATTTTGGCCATTGAAATAATCGGTAAAAGTTTATTTGGCCCTGCAAAGACAATATTTTGCTCTCAAAGTGCTGACTTCTGTGAGGAGGTTACAAAGCACCTGTGTGACCGGTGGAACATAGCATTAAGAGTGTTGCCAGTAGACCAGCCGCAGAGGAACGCGCTGTATGATCGCAGCAGTAATCTGCTGAGAGATGCCATAAAACAGATGGTGGTGGAGAAACAGGTAGAATGGGATGATTTTCTTGATCCAGTTTTGGCCATCTTTAGGACGTCAGTCAACCCTACGACAAAATTTACGCCACACTTTTTAATGTTTAACAGAAAAGCCAGCATATCTAATGAGACAAAGTTTGATCCTCTCAGTTGCTATCCGGACCAGGAGGAGGATACCCTTAATGAAGAGGACACAAACTCTTTTCTTTCCTCCATGCAGGAGCAACAGAACAACATCAAACAGCTGGTAGTTACAAATATGAATGTCGCCTACAGACAAGAAAAGAAAAATGCAAAACGCAAGGCTAGAAACATGCCCTCCATAACTCTCACTGTGACCGACCCTTTGTTCAGCACAGAGGAATCGCCCTCAGCAAAAAAGCTTAAGGAAAGCCTCTACTTGTCTTTTCCAGTAGAGACTGTCCTAACCACAATACAGAATGTACCTGAAGCCAAGAAGAATGGCTTAGAATATCCTCTAACAGACACTGATGTGCACTGAAAATCATTTTTGATGGGACTGATCACTATCCGCAAAGTGTATTTGCATAGACTACAGCTTGAAGACCAGTAAGGTGGTCCACAGAGAGCATATCAAGTAGATGAACTCATGCTCACTTTCTGTTTCACCACATAATGTAGCAAGATTAAAATATTGTATTTCAGCTCAAGGCGTTCATTGACACTAATGATGGTCTTAGATTGTGCTTATTATTTTACAGAATAGTATTTTTTACAAAGTGAGGTCGTTATGTTAGTCTTTCACTGAACTACACACCCAAAGATGTTTTTTTCGCTTAGGTGACTCATGTCCCAGAACACATTTTTATCTGTATTTCCTTTGGATAAGTCATCTGAAGTACAGAGATTTCAGTATTATCTGTAAAAATGTTGTGTAAACATTAACTATGAAGGTTATAATATTCAGTGCTCATTATCACAGAAAATAGTTGTTAGTTGTTGTTTTGCCTAACTTGTTTTTTTTTTTTTTTGTCTCAAATGGTTTCAAACTTTACCTCATAAATGATTTTTGCGCCATTCTGTTGTCCAACAATTGGCTGTTTTCATTTGTAATAAA

Function

GO:

id name namespace
GO:0015074 DNA integration biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000339_04449553_04451937.mRNA True 1746 mRNA 0.40 7 4448977 4451937

Neighbor

gene id symbol gene type direction distance location
CI01000339_04441515_04447089 ABCB9 coding downstream 1888 4441366 ~ 4447089 (-)
CI01000339_04428882_04435809 NA coding downstream 13168 4428788 ~ 4435809 (-)
CI01000339_04388819_04415624 PPP3CCA, PPP3CCB, PPP3CC, PP2BC coding downstream 33353 4388392 ~ 4415624 (-)
CI01000339_04347010_04347312 CLG1H8ORF4, C21H8ORF4, CLG13H8ORF4 coding downstream 101583 4345953 ~ 4347394 (-)
CI01000339_04303248_04303541 NA coding downstream 144823 4302943 ~ 4304154 (-)
CI01000339_04456736_04479850 SLC4A5 coding upstream 4220 4456157 ~ 4479850 (-)
CI01000339_04500444_04509959 NA coding upstream 48320 4500257 ~ 4510782 (-)
CI01000339_04704467_04717848 NA coding upstream 252153 4704090 ~ 4718867 (-)
CI01000339_04723905_04731220 NA coding upstream 271573 4723510 ~ 4731220 (-)
CI01000339_04734544_04737942 NA coding upstream 282207 4734144 ~ 4738241 (-)
G483431 NA non-coding downstream 77716 4371042 ~ 4371261 (-)
G483429 NA non-coding downstream 78840 4369852 ~ 4370137 (-)
G483365 NA non-coding downstream 170565 4277691 ~ 4278412 (-)
G483366 NA non-coding downstream 214078 4217372 ~ 4234899 (-)
G483442 NA non-coding upstream 24980 4476917 ~ 4477170 (-)
G483443 NA non-coding upstream 26327 4478264 ~ 4478485 (-)
G483444 NA non-coding upstream 36986 4488923 ~ 4489161 (-)
G483445 NA non-coding upstream 37569 4489506 ~ 4489795 (-)
G483446 NA non-coding upstream 38809 4490746 ~ 4491125 (-)
G483285 NA other downstream 278475 4125258 ~ 4170502 (-)
G483199 NA other downstream 670426 3777891 ~ 3778551 (-)
G483104 NA other downstream 1035986 3394108 ~ 3401228 (-)
CI01000339_01988812_02024891 NA other downstream 2451532 1988537 ~ 2025183 (-)
G481662 NA other downstream 2715958 1723770 ~ 1733019 (-)
G483509 NA other upstream 160915 4612852 ~ 4613318 (-)
G483512 NA other upstream 166175 4618112 ~ 4618725 (-)
G483481 NA other upstream 399820 4851757 ~ 4853447 (-)
G484394 NA other upstream 804630 5274086 ~ 5274270 (-)
G484702 NA other upstream 1571795 6021828 ~ 6024822 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location