Gene
RNA
| Item | Value |
|---|---|
| gene id | G481855 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000339 |
| NCBI id | null |
| chromosome length | 8057057 |
| location | 2552923 ~ 2555109 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU552950 | True | 1821 | lncRNA | 0.38 | 2 | 2552923 | 2555109 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000339_02534217_02550941 | ATP6V0A2B, ATP6V0A2 | coding | upstream | 1699 | 2534217 ~ 2551224 (+) |
| CI01000339_02520632_02526538 | DGCR8 | coding | upstream | 26019 | 2519398 ~ 2526904 (+) |
| CI01000339_02369904_02370487 | NA | coding | upstream | 182338 | 2369319 ~ 2371316 (+) |
| CI01000339_02362904_02366296 | NA | coding | upstream | 186423 | 2362684 ~ 2366500 (+) |
| CI01000339_02355753_02358594 | ZDHHC23A | coding | upstream | 193176 | 2355159 ~ 2359747 (+) |
| CI01000339_02724520_02726734 | NA | coding | downstream | 169411 | 2724520 ~ 2727177 (+) |
| CI01000339_02821530_02821886 | MRPL41 | coding | downstream | 265467 | 2820576 ~ 2823479 (+) |
| CI01000339_02827191_02829073 | NA | coding | downstream | 272082 | 2827191 ~ 2829258 (+) |
| CI01000339_02881178_02904181 | NA | coding | downstream | 324833 | 2879942 ~ 2905073 (+) |
| CI01000339_02906594_02907565 | FUT7 | coding | downstream | 351181 | 2906290 ~ 2907736 (+) |
| G481851 | NA | non-coding | upstream | 41749 | 2509349 ~ 2511174 (+) |
| G481860 | NA | non-coding | upstream | 120463 | 2432184 ~ 2432460 (+) |
| G481771 | NA | non-coding | upstream | 228517 | 2316933 ~ 2324406 (+) |
| G481760 | NA | non-coding | upstream | 239383 | 2304061 ~ 2313540 (+) |
| G481899 | NA | non-coding | downstream | 89691 | 2644800 ~ 2652322 (+) |
| G481898 | NA | non-coding | downstream | 162641 | 2717750 ~ 2719934 (+) |
| G482004 | NA | non-coding | downstream | 284746 | 2839855 ~ 2840668 (+) |
| G482035 | NA | non-coding | downstream | 346557 | 2901666 ~ 2901935 (+) |
| G482048 | NA | non-coding | downstream | 394513 | 2949622 ~ 2950082 (+) |
| CI01000339_02196706_02198050 | GABARAPL1, GABARAP.L, GABARAP, GABARAPA, GABARAPB, BRAFLDRAFT_122660, GBRAP | other | upstream | 354114 | 2196307 ~ 2198809 (+) |
| CI01000339_01571624_01576903 | NA | other | upstream | 975220 | 1571624 ~ 1577706 (+) |
| G481321 | NA | other | upstream | 1262190 | 1289321 ~ 1290733 (+) |
| G480761 | NA | other | upstream | 1912546 | 634414 ~ 643423 (+) |
| G480663 | NA | other | upstream | 2374940 | 177668 ~ 177983 (+) |
| CI01000339_03088452_03091633 | NA | other | downstream | 532684 | 3088110 ~ 3091633 (+) |
| G483672 | NA | other | downstream | 2672214 | 5227323 ~ 5239784 (+) |
| CI01000339_05599544_05600935 | TIMM8B.S, TIMM8B | other | downstream | 3045352 | 5599544 ~ 5602261 (+) |
| CI01000339_06041909_06043927 | ATP5L | other | downstream | 3486708 | 6041817 ~ 6044034 (+) |
