G482048


Basic Information

Item Value
gene id G482048
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000339
NCBI id null
chromosome length 8057057
location 2949622 ~ 2950082 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU553152
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTACATTTACAGTGACTCATTTCTAAATGGTATATGTTGGGTGTTTTTAAATTTCTGATGCCCAAGAATACCACTAAATTATAATAATCCCCTTGCGAAGGAACCCCATTTTATTTTATTTTATTTTATTTTATTTTATTTTTTTTTTTTGCTCTGAACTTTTCCAAGTTCCTGAAAACCCCTGGTATATGTCACAAAAAGACAACAAGGCATTATTTTCTAAAAACAGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU553152 True 381 lncRNA 0.18 2 2949622 2950082

Neighbor

gene id symbol gene type direction distance location
CI01000339_02926088_02926877 NA coding upstream 22623 2925953 ~ 2926999 (+)
CI01000339_02922115_02925261 CARNMT1 coding upstream 24318 2922115 ~ 2925304 (+)
CI01000339_02906594_02907565 FUT7 coding upstream 41886 2906290 ~ 2907736 (+)
CI01000339_02881178_02904181 NA coding upstream 44549 2879942 ~ 2905073 (+)
CI01000339_02827191_02829073 NA coding upstream 120364 2827191 ~ 2829258 (+)
CI01000339_03088452_03091633 NA coding downstream 138028 3088110 ~ 3091633 (+)
CI01000339_03092627_03099083 NA coding downstream 142545 3092627 ~ 3099210 (+)
CI01000339_03140715_03144128 ZFAND5A coding downstream 190455 3140537 ~ 3145379 (+)
CI01000339_03174100_03188909 ABHD17B.S, ABHD17B, F108B coding downstream 224018 3174100 ~ 3189475 (+)
CI01000339_03192684_03218127 TMEM2 coding downstream 242602 3192684 ~ 3218667 (+)
G482035 NA non-coding upstream 47687 2901666 ~ 2901935 (+)
G482004 NA non-coding upstream 108954 2839855 ~ 2840668 (+)
G481898 NA non-coding upstream 229688 2717750 ~ 2719934 (+)
G481899 NA non-coding upstream 297300 2644800 ~ 2652322 (+)
G481855 NA non-coding upstream 394513 2552923 ~ 2555109 (+)
G482069 NA non-coding downstream 130311 3080393 ~ 3083969 (+)
G482139 NA non-coding downstream 134085 3084167 ~ 3084374 (+)
G482192 NA non-coding downstream 179569 3129651 ~ 3130283 (+)
G482193 NA non-coding downstream 182230 3132312 ~ 3132573 (+)
CI01000339_02821530_02821886 MRPL41 other upstream 125729 2820576 ~ 2823479 (+)
CI01000339_02196706_02198050 GABARAPL1, GABARAP.L, GABARAP, GABARAPA, GABARAPB, BRAFLDRAFT_122660, GBRAP other upstream 750813 2196307 ~ 2198809 (+)
CI01000339_01571624_01576903 NA other upstream 1371919 1571624 ~ 1577706 (+)
G481321 NA other upstream 1658889 1289321 ~ 1290733 (+)
G480761 NA other upstream 2309245 634414 ~ 643423 (+)
G483672 NA other downstream 2277241 5227323 ~ 5239784 (+)
CI01000339_05599544_05600935 TIMM8B.S, TIMM8B other downstream 2650379 5599544 ~ 5602261 (+)
CI01000339_06041909_06043927 ATP5L other downstream 3091735 6041817 ~ 6044034 (+)
G484139 NA other downstream 3996304 6946386 ~ 6966146 (+)

Expression


Co-expression Network