G483862


Basic Information

Item Value
gene id G483862
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000339
NCBI id null
chromosome length 8057057
location 5835833 ~ 5836223 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU555199
CTTATTTGCATGAATATTTTATTTTAAAAGCTGCTCAGCAATAAAAACCTGCCAGCTTTCACTCACAGTCCAATTCAGGGTTAGTCCAACTTTTAAAAACTATTTTAAAATTAAAATAAGTAAATAGAAAAATAAAAATGGTATAGAAACCATTTAAAATACTTTTAATCAAAATTTAAAAAAAAAAAGAAAAAAAAAAAAGTGTTGAATAAAGAGTTAATTAAGTTTGCTTACTGAAGACATAGGTCGGAGATTCCAAGCAGCAGGTTCTTCTTGAATAAGACTTACTGGGGTACCCTATAGATGTTTCACCCCCCAAAAAATAAATAAAAATCAGAATGGTTGCATATGGTCAGGTATGACAATTCATGATTCATCAATTGAAACAATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU555199 True 391 lncRNA 0.28 1 5835833 5836223

Neighbor

gene id symbol gene type direction distance location
CI01000339_05655376_05675186 ADAMTS15A coding upstream 160250 5655179 ~ 5675583 (+)
CI01000339_05599544_05600935 TIMM8B.S, TIMM8B coding upstream 234617 5599544 ~ 5602261 (+)
CI01000339_05544723_05561118 NA coding upstream 273864 5544318 ~ 5561969 (+)
CI01000339_05456563_05486320 UBASH3B, UBASH3BA coding upstream 349360 5456041 ~ 5486473 (+)
CI01000339_05434579_05443951 NA coding upstream 391676 5434495 ~ 5444185 (+)
CI01000339_05836831_05840321 NA coding downstream 608 5836831 ~ 5840733 (+)
CI01000339_05841485_05849982 STK36 coding downstream 5262 5841485 ~ 5850533 (+)
CI01000339_05924933_05931878 HMBS, HMBSA coding downstream 88492 5924715 ~ 5932584 (+)
CI01000339_05968915_05972679 DPAGT1 coding downstream 132107 5968330 ~ 5973090 (+)
CI01000339_05974223_05980520 HINFP coding downstream 138000 5974223 ~ 5980566 (+)
G483860 NA non-coding upstream 7919 5827690 ~ 5827914 (+)
G483859 NA non-coding upstream 8155 5827369 ~ 5827678 (+)
G483856 NA non-coding upstream 10371 5825234 ~ 5825462 (+)
G483843 NA non-coding upstream 33075 5802553 ~ 5802758 (+)
G483826 NA non-coding upstream 85888 5749415 ~ 5749945 (+)
G483822 NA non-coding downstream 82605 5918828 ~ 5920723 (+)
G483894 NA non-coding downstream 210196 6046419 ~ 6046876 (+)
G483907 NA non-coding downstream 366167 6202390 ~ 6207166 (+)
G483980 NA non-coding downstream 457477 6293700 ~ 6293903 (+)
G483981 NA non-coding downstream 457993 6294216 ~ 6294517 (+)
G483672 NA other upstream 596049 5227323 ~ 5239784 (+)
CI01000339_03088452_03091633 NA other upstream 2746128 3088110 ~ 3091633 (+)
CI01000339_02821530_02821886 MRPL41 other upstream 3011940 2820576 ~ 2823479 (+)
CI01000339_02196706_02198050 GABARAPL1, GABARAP.L, GABARAP, GABARAPA, GABARAPB, BRAFLDRAFT_122660, GBRAP other upstream 3637024 2196307 ~ 2198809 (+)
CI01000339_06041909_06043927 ATP5L other downstream 205594 6041817 ~ 6044034 (+)
G484139 NA other downstream 1110163 6946386 ~ 6966146 (+)
G484134 NA other downstream 1110570 6946793 ~ 6947480 (+)
G484172 NA other downstream 1278360 7114583 ~ 7115459 (+)

Expression


Co-expression Network