G483894


Basic Information

Item Value
gene id G483894
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000339
NCBI id null
chromosome length 8057057
location 6046419 ~ 6046876 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU555234
CTGCAAAACAACACGTACGCCCAAGTGAAGGCGGTTTAAAAACTAAACCGGGTAAGCTAACACAAAACTGTTAACATAAACTTTATGCGGTATGTTACAATAAAAACCTTACCTTCAGAGGATATTAGTAACGACAAGTTTCAAAGACTATAGCTCACAAAAAAAAACAGAGCATCCAGCAGTGGGAACGCCCACTACAACCAGCAAAACAGCGACCTTTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU555234 True 223 lncRNA 0.40 2 6046419 6046876

Neighbor

gene id symbol gene type direction distance location
CI01000339_06041909_06043927 ATP5L coding upstream 2411 6041817 ~ 6044034 (+)
CI01000339_06033619_06038517 PDZD3B coding upstream 7879 6033619 ~ 6038540 (+)
CI01000339_05994065_06027592 ABCG4, ABCG4A, ABCG4B coding upstream 17872 5994065 ~ 6028547 (+)
CI01000339_05982674_05984181 NA coding upstream 62218 5982674 ~ 5984201 (+)
CI01000339_05974223_05980520 HINFP coding upstream 65853 5974223 ~ 5980566 (+)
CI01000339_06060658_06063401 NA coding downstream 13688 6060564 ~ 6063401 (+)
CI01000339_06069549_06075897 RUVBL2.L, RUVBL2 coding downstream 22673 6069549 ~ 6076100 (+)
CI01000339_06208270_06213269 UBE2G1A, UBE2G1 coding downstream 161394 6208270 ~ 6214195 (+)
CI01000339_06216378_06233911 ANKFY1 coding downstream 169502 6216378 ~ 6234136 (+)
CI01000339_06238852_06254371 ZZEF1 coding downstream 191449 6238325 ~ 6254478 (+)
G483822 NA non-coding upstream 125696 5918828 ~ 5920723 (+)
G483862 NA non-coding upstream 210196 5835833 ~ 5836223 (+)
G483860 NA non-coding upstream 218505 5827690 ~ 5827914 (+)
G483859 NA non-coding upstream 218741 5827369 ~ 5827678 (+)
G483856 NA non-coding upstream 220957 5825234 ~ 5825462 (+)
G483907 NA non-coding downstream 155514 6202390 ~ 6207166 (+)
G483980 NA non-coding downstream 246824 6293700 ~ 6293903 (+)
G483981 NA non-coding downstream 247340 6294216 ~ 6294517 (+)
G483989 NA non-coding downstream 259227 6306103 ~ 6358859 (+)
G483904 NA non-coding downstream 423979 6470855 ~ 6472834 (+)
CI01000339_05599544_05600935 TIMM8B.S, TIMM8B other upstream 444158 5599544 ~ 5602261 (+)
G483672 NA other upstream 806635 5227323 ~ 5239784 (+)
CI01000339_03088452_03091633 NA other upstream 2956714 3088110 ~ 3091633 (+)
CI01000339_02821530_02821886 MRPL41 other upstream 3222526 2820576 ~ 2823479 (+)
G484139 NA other downstream 899510 6946386 ~ 6966146 (+)
G484134 NA other downstream 899917 6946793 ~ 6947480 (+)
G484172 NA other downstream 1067707 7114583 ~ 7115459 (+)

Expression


Co-expression Network