CI01000340_03750211_03772917


Basic Information

Item Value
gene id CI01000340_03750211_03772917
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 3749935 ~ 3773916 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_03750211_03772917.mRNA
ACCTGCTACCTTGAAATATGAAACACCTTTCATCTCGTCCGCCAATCAAAGGATGTTGTGCGGCGAATAAAAGTATCTACACCACCAAGGAAAGAAAATAGTAATGGTAATAGATTCAATAGTGATAATGGTAATGGACTCTTTTATTCTGACTAGTTACTTTAATCTATCATACAACATCTAGAAGAAAAAAAACTAAGAATCATTTAGGCCTGAGACTTATTGTTCATGAAGTGTACAACCCAGGCTCAATGGAAATATGTGCCTGTGGTGACATCTCTGCAAAATATCACATTGCTTCTTGAACATTTTGTGACCCTTTCAAAGTGAAATGTCCTGTGAGTGGCGCTAAAAACATGTTCAGTTTTATTTGAAATAGATTACTGTGAATCTGGCAATGTTTTATTATGTTGGTTGTTCTATGAATTGGCATAGTTTGGAAATTAAATGTCCAGTCATTGGCGCTAAAAGATTAATGCTCTATTGTGTTTGAAAATAATGTACCACCTATACTAAACCCTACCCTAAACCTAAACGATTGTGTAAAAAAAAAAAAAAAAAAAAAGTGAAGCAACAATGCCCTTTTAGCTTGTTTCTACGAGTCTTTGAGCTCTTTTATCATTACTCGTGTTACACAGGAATCGTACCCATGCAATCCGCATCGCAAGTGCAGTGCTGTACCAGGTGAGCTTCTGAGCAAGTTTACTACATTAGAAGGGCCATATACTGTATTAGGAGCTGGTTGTTGGCGTTTTACTGCCACTAGTGTTCATTACTTTTGGAAACTGCCATGAAGTATGTATAGGTACCAAGAAAAAAAATGTAGGTAGGCACATTTTTCTAATGAGCCTAAGCTGGAAATGTACCAACAGATGTTGCACGCTTGAAGGAGCTTTTCTGAGTAACAGAACCTCTGAGCAGGTATGGTCATGAGCATTAGAGACGCTTGGTATAGCATCAAAGATCTAGGACAGCAGCCGAAGGAGGTCTCTTGTGAGGATGAATTGGCTTTTCCTGCCTTTTCTAAGTCAAGATAATCAGGCTAGATCTAGTGCAGCCAAGAGAGAGAAAATTCAGAAAGAGACAGAGACTGGGAACAACAGTAAGCTACATTATTGTCCACTGAAGCCCAATAACAAGACAACAGTTCATAACAGAATCATCTTAATCAGATCTGACTCTGAGCACACCTGCCTGGCTGACAGCCCCCAGAGACAAGATTGTGGTTTAATGGCACAATGTTTCTTCTGTCCCACAGCCAATGAGAGCAGAGCAGTTGCTAGCACTGTGCTGACGTTAACATTTAACCATGGGATGGTGACGGGGAAAGACTCTAGGGCTGCAGATAAGACCGTTGCCATGGTCCTGAAGGAGATACCCAATAAGGCGTCCTCAGAAGGCAAGCCCCTCCTCACGGTGACAAACAAGACAGAACAGCTCAATAAATCCTCTGTCAACAAGATTGCTATTGAAATAATCAGACTAATAAGACTAATCAGTTAACAAAGTAGCCGAACTGTTCTGTACCGTGACTGTAGTTATCTGCTCTAATTACAAGAATGAGTTTTGTCCCCTTAATAATTCCTATTAATGTCAACAACCAATTTGTGCCAGAAATGAAAAACAGTTTTAAACAGAATACAGGGCAATCTAATTAAGTTGTACAGCCCAAAATGTTTCCAAAACAATTCTCCCCCTCTCATTATGGCCCTTGTTCTGCTGGCATTCACAAGGGAGGAAATTATGCTTTTTTAATAAGGCTTAGAGGGGCAAAATAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_03750211_03772917.mRNA True 1779 mRNA 0.40 4 3749935 3773916

Neighbor

gene id symbol gene type direction distance location
CI01000340_03713291_03747080 PEX5L, PEX5LA coding downstream 2663 3712753 ~ 3747272 (-)
CI01000340_03670820_03675367 NA coding downstream 74568 3670713 ~ 3675367 (-)
CI01000340_03622734_03659141 TMEM131 coding downstream 90779 3621970 ~ 3659156 (-)
CI01000340_03607549_03614126 BIVM coding downstream 135809 3607130 ~ 3614126 (-)
CI01000340_03561521_03596697 NDK7, NME7 coding downstream 153238 3561479 ~ 3596697 (-)
CI01000340_04086574_04090310 NA coding upstream 312314 4086230 ~ 4090310 (-)
CI01000340_04277249_04284722 NA coding upstream 503223 4277139 ~ 4285407 (-)
CI01000340_04362537_04371224 LURAP1 coding upstream 588459 4362375 ~ 4371224 (-)
CI01000340_04381260_04383972 TTC4 coding upstream 607168 4381084 ~ 4383972 (-)
CI01000340_04384950_04386594 PARS2 coding upstream 610894 4384810 ~ 4386594 (-)
G488582 NA non-coding downstream 128303 3618019 ~ 3621632 (-)
G488664 NA non-coding downstream 205339 3544379 ~ 3544596 (-)
G488663 NA non-coding downstream 205885 3543462 ~ 3544050 (-)
G488651 NA non-coding downstream 224335 3525348 ~ 3525600 (-)
G488649 NA non-coding downstream 228339 3521372 ~ 3521596 (-)
G488588 NA non-coding upstream 89236 3863152 ~ 3863573 (-)
G488568 NA non-coding upstream 93888 3867804 ~ 3869876 (-)
G488748 NA non-coding upstream 97768 3871684 ~ 3872011 (-)
G488750 NA non-coding upstream 100542 3874458 ~ 3874738 (-)
G488593 NA non-coding upstream 118853 3892769 ~ 3893172 (-)
G487884 NA other downstream 1847663 1895801 ~ 1902272 (-)
CI01000340_00787534_00791061 NA other downstream 2958526 786551 ~ 791409 (-)
G485786 NA other downstream 3424219 325334 ~ 325716 (-)
CI01000340_00062787_00080635 NA other downstream 3667840 62780 ~ 82095 (-)
G488782 NA other upstream 231889 4005805 ~ 4006448 (-)
G488862 NA other upstream 733280 4507196 ~ 4518120 (-)
CI01000340_04598932_04627160 NA other upstream 826304 4598714 ~ 4627447 (-)
CI01000340_05321995_05329778 ATG4C other upstream 1546837 5320753 ~ 5330215 (-)
CI01000340_06095704_06194498 MAST2 other upstream 2409374 6095704 ~ 6194501 (-)

Expression


Co-expression Network