CI01000340_09064514_09065350


Basic Information

Item Value
gene id CI01000340_09064514_09065350
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 9064171 ~ 9066523 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_09064514_09065350.mRNA
CTTTAAATACCTCCTCTAGCTATAATGTGCATCATTTCTCAACGATGAACAAAAAGTAATAGCAGGTTTTTTGTGAATCTCATTTTTGTGTTGTGTTCCTTAAAATACCTTCTTCCTCTATTTTTTTTTCATTATCTCTCAATGAGGAATAAAAAGTAGACTATAATTTCTATAAATTTCTAGAATTTTGCATACAATGTAATAGTAACATTGTACAGAGTTTTTCTGTGAACTTTAACACAGATGCCATCAAATATTCCTTTAGCATGTACAGTATGCAAAAAAAATTTTTTTTATTTATTTTTCATTATATATTTATCATTTTGATTTTCCAGGTGTGGTAATGATGCAGTGGTCATCTGAGTGGGCGGAGCAACACTATGATGTCTCCTCCACCACATCATCTCCAGTTCACCCTAAGCCCCTCCCATTCCCTCAGCCCAGTCGTCCTGCGTTCTCAGGCTACACGGATGACATCAGTGCCCTCAGTGCCTCTAGCTTGCTAAAGCGCTATGCAGAGAGGTATTCCTTCAACTCAGCCTTACCAGAACATGGGAGTTTCCTGAGAAGTGAGCAGCACCAGGAGCCGTGGCCTGGGGGGTACAGCACAGATGGGCCTCCCGGTTTAGACCCACTGAAGGGGAGCGGAAGTGATCTTTCAGAGCAGCAGTACAGCAGCGGTCCCACGTCTCAGGATTACCCTTCATCCTACAGCAGCCAACATCTGCTACCCAAACCATCCTATCTTCCGTCACCAGCGTTTGCCTTGCCGTCTGCATACCTGCCCCCCGCACCAGGTTACGCTTATCCCCAGCAATGCGGTCTGACGGCTAGTTACCCTCACAGCACCCCTGCTCTGCTGCCCTCGGGTCTACACACCCCCACACCTCTTCACAGCAGCCACGGTGCTGCTGAACTCCCACGCAACAGGAAGTTTGGCTTCGACCAGTCCAAAACTGCCAGAGTGTCACCTTACACAATCAGGGACAAAAGCGAACGGCAGAACAGTGACAGTGGTGGAAATGTCAATGAAAGCTGTGGGACGGACATCCAGAGCTACAGGCCCGATAGACTTTCCACTCAGTCCGACCTCGAGGCAGATTCTGTGGGCAAGACCAGTCACCTACGACCTCCGGAGACAAGGTCTTATGGAGGTCCGGGACAGTACACATATCCCTGAGTCTGCTTGATGTAGTCAGTCGATCCTTTTTTTTATACGTGATTATAGCAATACTTGAACGTGTCAAACATCAGGGCGAATATTATACGGTATGAGACCAGATTATAGGCTGAGAAGATAGATGTCTCTCTTATGCACATTATCATTATTCCTAACTGCAGCTTCAATGTGACCTATAGCACAAACACTCTTTTATATCCCTGAAATCACTCTTCTTTTTTTATACTCTTCCTTTCCTCTTTTACACTCTCTCTCTCTCTCTATAATTATGTTGTGCAGTGAAGCACATTATGGTGGCAAGCACTAATCCACCGCTTCAATCAATGAAATCCAAGCCAAAGAAGGACTGAAAGAGAGGAATGGAAAAGAGAAAGAGAAATATGGTAAATCAAAACACACATTTGATTGTAAATCAAAGCACACACATGAAAGTTTCATATGTCATATGTGTAATATAAGGTTTTCATACATTTTGTTAGTGATCATGTGAACGATAATTGTCATGGATGTTCTTCAACACTGAAGTCAGTGGGATAAAACAGTCTTATTTTAGGAATATTATCCTCTATAAACTTTGAATGTAAATCTGATTTCCCTCAGGAATTGTGAATGAAGCCATACTTAATGTTTAAATTTTGAGTTTGACAGATGTTTTTGTCTTTTATTGTCTAGTTAGTGTAGTTTCTTTGTCATGCACATCATTAAAAAAATATTTGTAACCTTACAAACAGTATTTCAATGATTACAGAACACATAATATATCTAGCTTTCGCAGGGCTACTGCAAAAAAGGCTAAAAGGGTCTTTTCCACTATTCACCTATTGTGACGTTTACTATGGAAACCCACAGAGCTGTCCCAGCCCCCTGAGTTGATCACTGGATGTGTTTTCCTCTGACCCTCTGACCTTTCTCTGTTTTAAATGAGGCATAGAGAGCTTTTGTTATGGAGAGGCAAATGGGACATAAACTGAAATGTACAAACCGAAATGAAAATGACAGTCTAGTTAATATTTAAATTTGAATTTTTATTTTAACACTCACAAATGCAGTATATGGAACAAAGTCATGTTATTACAATTTTCATCTACCTCACTGTTACATTGCTGTATGTTCAGAGTATGCAATTGTGTGTTACATGTCTAAATGTCTACCTCAAGAAAAAAAATACACGAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_09064514_09065350.mRNA True 2353 mRNA 0.41 1 9064171 9066523

Neighbor

gene id symbol gene type direction distance location
CI01000340_09053887_09057663 NA coding upstream 6508 9053887 ~ 9057663 (+)
CI01000340_08999872_09005509 NA coding upstream 58187 8999438 ~ 9005984 (+)
CI01000340_08970483_08982079 B4GN1, B4GALNT1B, B4GALNT1 coding upstream 80760 8970442 ~ 8983411 (+)
CI01000340_08938200_08942073 NA coding upstream 121547 8938152 ~ 8942624 (+)
CI01000340_08905333_08906557 GPR84 coding upstream 156170 8905333 ~ 8908001 (+)
CI01000340_09133213_09134688 METTL7A coding downstream 65959 9132482 ~ 9134688 (+)
CI01000340_09137611_09140263 NA coding downstream 70187 9136710 ~ 9140263 (+)
CI01000340_09293326_09302243 C1QL4, C1QL4B coding downstream 226661 9293184 ~ 9302415 (+)
CI01000340_09305181_09322207 SMARCC2 coding downstream 238658 9305181 ~ 9322390 (+)
CI01000340_09339973_09344291 ENDOU coding downstream 273388 9339911 ~ 9344393 (+)
G490800 NA non-coding upstream 12025 9052002 ~ 9052146 (+)
G490648 NA non-coding upstream 47619 8991150 ~ 9016552 (+)
G490762 NA non-coding upstream 153901 8909939 ~ 8910270 (+)
G490759 NA non-coding upstream 162388 8901571 ~ 8901783 (+)
G490746 NA non-coding upstream 200802 8863105 ~ 8863369 (+)
G490823 NA non-coding downstream 52086 9118609 ~ 9119265 (+)
G490829 NA non-coding downstream 97643 9164166 ~ 9164806 (+)
G490808 NA non-coding downstream 111321 9177844 ~ 9218507 (+)
G490845 NA non-coding downstream 156978 9223501 ~ 9223806 (+)
G490950 NA non-coding downstream 267074 9333597 ~ 9336674 (+)
G490645 NA other upstream 21070 9038812 ~ 9043101 (+)
G489634 NA other upstream 2363383 6694221 ~ 6700788 (+)
CI01000340_04660938_04668996 NA other upstream 4398986 4659584 ~ 4669322 (+)
CI01000340_04399692_04401164 NA other upstream 4662675 4399419 ~ 4401496 (+)
G487133 NA other upstream 5081626 3973915 ~ 3982545 (+)
G490826 NA other downstream 58661 9125184 ~ 9131397 (+)
G490839 NA other downstream 168450 9234973 ~ 9237559 (+)
G490896 NA other downstream 764950 9831473 ~ 9845052 (+)
G492194 NA other downstream 1585160 10651683 ~ 10652694 (+)
CI01000340_10781781_10785861 CAMKVA, CAMKVB, CAMKV other downstream 1716879 10781468 ~ 10787792 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location