CI01000340_14894726_14899916 (OSGN1)


Basic Information

Item Value
gene id CI01000340_14894726_14899916
gene name OSGN1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000340
NCBI id null
chromosome length 19571558
location 14893593 ~ 14899916 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000340_14894726_14899916.mRNA
CCGCTCTGCTTGTACATTCAAGACTTTGCTGTCTTAAGTGAAGCCTTATTCGCACCTCGGATATTTGCATTAAAGGTAGTGGACAGCACGCTTATGAGAGCGCACGCGCACGCCTGTAATACAAGCATCTGGGTTACGCATCAGACGGTTACCGGCTTTCGTGTAATCTTCGTTAAATGCAATCCAGTTGAGCTGCAGCATGGGGTTTCTGATCAGGCTATTCCCGCATCCTACCCGTTAAAGGGGCGGAGAGGCTCGCGTGCACACAATGCGACTGAAACCGTCGCTGGGAAACGCATGTTGTCCTCTCTGGAAAGTTCTGTGGAGCCCAGAATACCTCCGATAGCCACTATGGAGCTGTACAACAAAGACACATTTTCTGAGGATATCCTGCCTGTTGTCATTGTTGGTAATGGACCATCAGGGATTTGCCTCTCTTATTTGCTGTCGGGATACACGCCTTACCTTTCCCCCGATGGCGTCCATCCCAACCCAATTTTGCATAACAAACTGACACAGAACCCTCATCTGTCTTTGCTTGACCAGGATCTGGAGTACCTGTGTGAGGGTGTAGAGGGACGTTCGTCAAACCCTGTGGCTGTGCTCTTCGATGCCCTCCTCCTTCCAGATGGCGACTTTGGTGTGGATTGCGCTTCCCCGCTGATATGGCGACATGAGCCGGAAAGGGCCACTCCCCACCTTGTACTGGGGAAGGGACCACCTGGAGGGGCCTGGCATGCGATGGAGGGCTCAATGTTGACTCTCAGCCTAGCTAACTGGATGGAACTTCCTGGTTTGAAGCTGAAGGACTGGATGAGAGATAAACGAAGAAATTTACGTAATGACCGGGCCACGCCAGCTGAGATTGCGTCCTACTACCAGCACTATGTGACTAAATTGGGTCTGGAGAGGAGCTTTGCTTGCGGCACAACCGTAACCTCAGTCTCTCGGGTTTCCCTTGAATCTAACTGCTTCATTTGGAAGATCCAAGGCCTCCAGAGAAGAGCAAATGGTGGTGAAGAAAAGGAAGTAATCGAAGTCCCATTCACTGTGTATGCAGAGAATGTGGTGCTTGCCACAGGAACCCATGACATCCCAGCCCGTCTCGGCGTGGAAGGCGAAAACCTTTCCTTCGTGTGCCACAGCTTCTGGGAGCTGGAGGCCGCCATTTCCTCAGGCCGTTTGGACGGCGCCTCTGAGCCAGTTCTTGTGGTTGGTGCTGGCTTGACGGCGGCAGACGCCGTTCTTGCAGCTCACCACTTGAACACACCTGTATATCACGCCTTTAGGCGACCTGTGACTGATCCGGGGCTCATCTTCAACCAACTGCCCAAACTCCTTTACCCTGAGTACCACAAAGTGCACCAAATGATGAGCCAACAGCAACACAAAGTGGGTGAGACGGTGGTTAATCTGTCCAACCAACCTGCTGAGAGCACCAACTCGTATACCTGTTACCCTGGTTACCTCAGTTACCCAAAGCACCGTGTGGTTGCCTTCAGACCTGATGGCAAGTGTGTGCTAGAGGATGAGGAAGGGCTACAGACAGTGCTACAAGTCTCAATGGCACTCGTTTTGATTGGTGCCCATCCCAACCTGTCATTCCTTCCAGAACATGGTCGCCCACTGGCGTTGGACTCAGAAGAGCCAATTAGCTGTCGGAGGAACCCGTTAGATGTGGATCCATACACGTACGAGAGCGTGAAGGAGCCAGGGATGTATGCCATGGGTCCACTGGTGGGTGAGAACTTTGTGCGGTTCCTGAAAGGTGGAGCTTTGGCCATTGCATGTGACATCGCTCGTAAACGAAGTACAAAACAACAAAGTGCTACAGAAAATCGCACAACCAGCTCATTGAATATTCAATTGACCAACTGCACCTTGGAAGCATGAAAAGACATAGACTTAAAAAGAGTATGTATAGCTATCTGGTACTTCCAAAATGGTTCAGAAATGCTCAGTGGTTCTGCTCCGACTGACGTGAAGGAACCAGTAGTTGAACGGTTCAAGACCGTTCCCACATCCCACTGCAAGTGCTTGCATGCAGACTGCGAATGCACTGACACAAATTTGTGTAGTTAATGGCTAACTAACCAGGCCTAAACATTAATCCGAGTCTACGCACACCGGGTGCTTTAACTTCAGGGATTCATTTGTGCATGGCTGCTCATTTGAAACACTACTCTTGTTCTCATTGCAATCTTGTTCTGTTGTGCCAAATTAATGTTTGTAATTGCCGTGTTTTCAAATCTAACATCTTCTTCGTGTAAGGAAAACACAAAACTAATCTTTGCCAAGCAAATGCTGCGGTTGTATCAATGTTGGTACTGACGCTCTTATTGTCTTCTTCTTTGATGAATGTAGAAACCTTGGTGGACCTAAAAAAGAAAGATCCTTGTAACATTTGGTCTTCCATACATTGCCTTCCCAAGTAAAGCATACACCTGTAGTGAGTCCATTGGTTATTCCAGCAAACCTGACTGTCTAGTTTTAAGGCTCTAAGATGTTCTTGTTTCATGCTGCTGTTGCTAACCAAAAGCCAAACCTCAGTGAGGTCAGGCTGCACTTACAAAACTGACCACGAGAGGGCCTTTGCACACCATGACTAAAGCCAGCAACATTGCATCAGACATAATGGTCCTTCATGACATTATTTGAATCAAGGATGCATCCAACATAAACTTATTTATGACTGATATGGGCCAAAATGTAACATTGCCTATGAGATTGACACATTAACTGTACTTTAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGATGAAATGCATATCTAGTTCATTTTAAGAAAACGATTCTACACTGAAGATTGCAACATTTGTTTCATCTTAAAAACGAATTGTACTGTATTTGGCTATAAGTTATGATCCCTGGCAGCTCTGATTAAACATGTTTGTAAATATGGTTTGTACTCTTTGGAAAGGAAAAAAATACAAACAAATATTGTATATTTTATGTACATTGATTCTTGCAGTCAAACACTTCAAATAAA

Function

symbol description
osgn1 Predicted to enable growth factor activity. Predicted to be involved in negative regulation of cell growth. Predicted to act upstream of or within positive regulation of apoptotic process. Is expressed in several structures, including anterior axial hypoblast; neural plate; periderm; pleuroperitoneal region; and polster.

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000340_14894726_14899916.mRNA True 3026 mRNA 0.46 7 14893593 14899916

Neighbor

gene id symbol gene type direction distance location
CI01000340_14872482_14891188 NA coding downstream 1975 14872080 ~ 14891618 (-)
CI01000340_14835497_14846831 MTSS1 coding downstream 46762 14835236 ~ 14846831 (-)
CI01000340_14823900_14824982 NA coding downstream 68206 14823771 ~ 14825387 (-)
CI01000340_14576054_14589873 RALY coding downstream 303390 14575836 ~ 14590203 (-)
CI01000340_14547725_14551493 NA coding downstream 340610 14546999 ~ 14552983 (-)
CI01000340_14910995_14919035 PIGU coding upstream 10683 14910599 ~ 14919357 (-)
CI01000340_15035570_15229330 PTPRT coding upstream 135654 15035570 ~ 15229330 (-)
CI01000340_15312803_15315594 NA coding upstream 412825 15312741 ~ 15315594 (-)
CI01000340_15318569_15329407 RBL1 coding upstream 418616 15318532 ~ 15330503 (-)
CI01000340_15334006_15357378 CHD6 coding upstream 433172 15333088 ~ 15357378 (-)
G494909 NA non-coding downstream 124379 14769004 ~ 14769214 (-)
G494854 NA non-coding downstream 136874 14754883 ~ 14756719 (-)
G494861 NA non-coding downstream 144153 14747970 ~ 14749440 (-)
G494867 NA non-coding downstream 148536 14743717 ~ 14745057 (-)
G494902 NA non-coding downstream 177019 14716291 ~ 14716574 (-)
G495450 NA non-coding upstream 394357 15294273 ~ 15295000 (-)
CI01000340_15418307_15418626 BLCAP.S, GM3852, BC10, BLCAP non-coding upstream 517856 15417772 ~ 15418667 (-)
G495459 NA non-coding upstream 525733 15425649 ~ 15430109 (-)
G495415 NA non-coding upstream 531300 15431216 ~ 15431529 (-)
G495502 NA non-coding upstream 567146 15467062 ~ 15467329 (-)
G494872 NA other downstream 334570 14557623 ~ 14559023 (-)
CI01000340_14318434_14336130 NA other downstream 573316 14318365 ~ 14336258 (-)
CI01000340_12577571_12625562 PTPRG, PTPRGA, CA16B other downstream 2220068 12577435 ~ 12625758 (-)
G493266 NA other downstream 2776693 12067177 ~ 12116900 (-)
G495475 NA other upstream 706825 15606741 ~ 15612563 (-)
CI01000340_16175837_16177624 NA other upstream 1271761 16171677 ~ 16178314 (-)
CI01000340_16515291_16518346 TUSC2A, TUSC2 other upstream 1614983 16514899 ~ 16518531 (-)
G496845 NA other upstream 2143807 17043723 ~ 17045688 (-)
G496853 NA other upstream 2277576 17177492 ~ 17242739 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_033176 osgn1 coding NC_007117.7 CM002890.2 50695381 ~ 50704689 (-)