Gene
RNA
| Item | Value |
|---|---|
| gene id | G491938 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000340 |
| NCBI id | null |
| chromosome length | 19571558 |
| location | 9624884 ~ 9625228 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU564293 | True | 269 | lncRNA | 0.45 | 2 | 9624884 | 9625228 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000340_09621058_09623347 | NA | coding | downstream | 1518 | 9621015 ~ 9623366 (-) |
| CI01000340_09569243_09577176 | TTLL3 | coding | downstream | 47708 | 9568227 ~ 9577176 (-) |
| CI01000340_09499658_09526119 | COL7A1 | coding | downstream | 98765 | 9499257 ~ 9526119 (-) |
| CI01000340_09489742_09491331 | NA | coding | downstream | 133344 | 9487214 ~ 9491540 (-) |
| CI01000340_09439272_09443734 | IP6K2B, IP6K2 | coding | downstream | 181150 | 9438381 ~ 9443734 (-) |
| CI01000340_09632037_09635287 | TATDN2 | coding | upstream | 6247 | 9631475 ~ 9635580 (-) |
| CI01000340_09637047_09638688 | VHL | coding | upstream | 11466 | 9636694 ~ 9638688 (-) |
| CI01000340_09640461_09646025 | CRBN | coding | upstream | 14588 | 9639816 ~ 9646025 (-) |
| CI01000340_09702982_09703952 | TSPO | coding | upstream | 77741 | 9702969 ~ 9704760 (-) |
| CI01000340_09744311_09747075 | PPIL1 | coding | upstream | 118344 | 9743572 ~ 9747307 (-) |
| G491875 | NA | non-coding | downstream | 17240 | 9605977 ~ 9607644 (-) |
| G491933 | NA | non-coding | downstream | 26783 | 9597631 ~ 9598101 (-) |
| G491869 | NA | non-coding | downstream | 65360 | 9559315 ~ 9559524 (-) |
| G491831 | NA | non-coding | downstream | 163246 | 9461386 ~ 9461638 (-) |
| G491660 | NA | non-coding | downstream | 486779 | 9133163 ~ 9138105 (-) |
| G491946 | NA | non-coding | upstream | 66380 | 9691608 ~ 9693371 (-) |
| G491970 | NA | non-coding | upstream | 140207 | 9765435 ~ 9766574 (-) |
| G491978 | NA | non-coding | upstream | 229678 | 9854906 ~ 9855304 (-) |
| G491980 | NA | non-coding | upstream | 233043 | 9858271 ~ 9858545 (-) |
| G491983 | NA | non-coding | upstream | 241821 | 9867049 ~ 9867353 (-) |
| G491712 | NA | other | downstream | 825307 | 8799201 ~ 8799577 (-) |
| G489511 | NA | other | downstream | 3297512 | 6320457 ~ 6327372 (-) |
| CI01000340_06095704_06194498 | MAST2 | other | downstream | 3404242 | 6095704 ~ 6194501 (-) |
| CI01000340_05321995_05329778 | ATG4C | other | downstream | 4299740 | 5320753 ~ 5330215 (-) |
| CI01000340_04598932_04627160 | NA | other | downstream | 4965823 | 4598714 ~ 4627447 (-) |
| CI01000340_10025958_10028902 | SRSF3 | other | upstream | 396664 | 10025656 ~ 10029589 (-) |
| CI01000340_10357202_10357606 | NA | other | upstream | 731956 | 10356758 ~ 10359856 (-) |
| G493109 | NA | other | upstream | 2048518 | 11673746 ~ 11677994 (-) |
| G493266 | NA | other | upstream | 2441949 | 12067177 ~ 12116900 (-) |
| CI01000340_12577571_12625562 | PTPRG, PTPRGA, CA16B | other | upstream | 2986988 | 12577435 ~ 12625758 (-) |
