XLOC_001373 (dre-mir-2197)


Basic Information

Item Value
gene id XLOC_001373
gene name dre-mir-2197
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 39373802 ~ 39373911 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00002265
AGTGTAAAAGGAAAACGTTGTGATGATTCGACTCATATGGTGCTATGCAGTAATAGAGGGCTGGAAGCATTTTGCTTGAGGAGAGTCTAATCACTAGCAGGTACACATTG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000085733

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00002265 True 110 miRNA 0.42 1 39373802 39373911

Neighbor

gene id symbol gene type direction distance location
XLOC_001372 vegfc coding downstream 465605 38850830 ~ 38908197 (-)
XLOC_001371 asb5b coding downstream 557117 38804961 ~ 38816685 (-)
XLOC_001370 gpm6ab coding downstream 616898 38649141 ~ 38756904 (-)
XLOC_001369 glra3 coding downstream 835518 38416106 ~ 38538284 (-)
XLOC_001368 hpgd coding downstream 958644 38398696 ~ 38415158 (-)
XLOC_001374 BX324137.1 coding upstream 301795 39675706 ~ 39677920 (-)
XLOC_001375 NA coding upstream 403738 39777649 ~ 39780017 (-)
XLOC_001376 dctd coding upstream 439318 39813229 ~ 39859626 (-)
XLOC_001377 tmem134 coding upstream 504723 39878634 ~ 39895918 (-)
XLOC_001378 stox2a coding upstream 524416 39898327 ~ 39977551 (-)
XLOC_001365 NA non-coding downstream 1183598 38175862 ~ 38190204 (-)
XLOC_001360 FP102961.1 non-coding downstream 2009812 37363872 ~ 37363990 (-)
XLOC_001357 NA non-coding downstream 2900980 36424768 ~ 36472822 (-)
XLOC_001356 NA non-coding downstream 3017336 36355781 ~ 36356466 (-)
XLOC_001355 NA non-coding downstream 3022314 36348693 ~ 36351488 (-)
XLOC_001380 CR847546.1 non-coding upstream 611994 39985905 ~ 39986160 (-)
XLOC_001385 NA non-coding upstream 782110 40156021 ~ 40156865 (-)
XLOC_001389 NA non-coding upstream 894634 40268545 ~ 40308625 (-)

Expression


Co-expression Network