CI01000344_03025864_03058509


Basic Information

Item Value
gene id CI01000344_03025864_03058509
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000344
NCBI id null
chromosome length 3248351
location 3024757 ~ 3058516 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000344_03025864_03058509.mRNA
ACTCCTGATGGGTGATATTGATGTGCGTTTGAGTGCCTGCGCTCAGGGATGCCAGTCTGCCAAGAGCCCAGTCTTCAACAAAAGTTACACAGACCGGGGACATCACCTGGTTAGAGATCTCCTTTTGTTCTCTATGCCTCACTTTGCCTATCGCTCCTATAAGCCCCGTCAGGCCGGGACATTTCTGAGGCCTGCCAATGGGATGAGAGAATGCAGTGAGGGGAGAGAGATGGAGAAGAAAAGCAGCTGCCACCAGAAAACAAACGTGACAGAGACAGATGATGTGATGATAGAGGGCTGGTCTGGTGTCCACCAGCCTCTCTTCTTTCCTGCACCCTGGCCTCTGGAAAGTGCTGAGCTGGCTCTTTCTCTCCCTCTGTCCTTCTCCTCCCTTCTCGCCCATGTTCTTTTGCTCTCTCCCAGCCAGTCAGAGTCACGGCAGTGGGACATGAACACAATGCTAATCAGGTTATCTCCTCATCTTGACCTCTTCCTTTCTCACTGTAGAGGTGATTCATTCATTGCTGCCACGTTTGCATTGATTCACTGCAGTAAATGCGGAATCTGGGTTGCCAGCTTTCTTCCTCGACTGCTGCAAAGCCGGACTTTGGAGATGAGGATGAGGATTTGTTTCTGGCAGAGCGACTTGTTGCTCTTGGGGCAAGGCTTGCGTTTGTTGGAGACCTGCCGGTTGGCCTGGGGGTCCTTAACTTCCCTGCGCTGTCGGATCAGCGAGCTGGCGAGGGCAGCCATTTTGCTGTGCCCCGCTCACCCGTGGGGTGCAGAGGGCGTCAGTGGGCCACCCACCTGTCCGATCACCCAGGGCCACGTAGGAGAGGAGCAGGAGACGGCAGATGTTCGGAGTACAGCGGGGTCTCGTTGCACAGCATATGGACTGGAAAAGTGTCAGCAGATGATCCATGAAGTCGTACTGGAATTCTGGAAAAAAAGTAAGCCATCACAGCAGCACCATCCTCTCTCTGTCCGGCTCTATTCCCTGCAGATCCGAGCTCCTAGAATCCCTGGCCTCTCACGTCCCTTCAACAATTTAGTTTGGGATCGATCTTTAGAAATCACCCGGATCAGAAATCATTCTGAGAGATCAGAAAAAAGGCATAAAACGTCCAATCGTTTTATCCCTATGGTTCAACATATCAGTGGGATCCCCATAAAACACAGGAGGATGCACGAAACGAACAAGCTAAAAAAATACAGATCCTACGAAGAAAAGGAACAATATCCTGAGACAATCTCAGTGAAACTCCATTACCTGATTCCAAAGTATCGCATCCATGCAAAAACAGAAAAACAAAGACAGACAAGCTGAGTAAAAGTCAAAAACTGGTGTCGTCAACCCTGGACCTCATATCTGTAGGTGATCAGATGGATAAGGATGAAAGGAATCGGAAGTTCTCTCCCTTCTCAGCCCTTCTGACATTCCCCTTTTCTCCCTCTCCCCAAGCTCCTGAGAGAGGGTTTGTAAATTCCAGCGGCTTCTGCAGACAGAGGTGACATTCATGAACGAATGAGAGTGCAGGAGAGCGGAGGGGAGCACCAAGCCTCCCCCAGACTCCCGTAAGGCAACCAGGCAGCGAGCGCTGAGGAACCCGTAGCTCCGTGTCCTTCACACCACTTGAGAGGAGAGGTGGGAGGGAGGCACGGATGGAGGGATGAAATGGAGGAATGTTAAGGATAGATGCTGCACATATCTGTTCGTCCGGCTTCACATGCTGTAAAGGTCCCGTTTAAAGAAGGTCCCTTTGGGTCTGTCCCAGCACTCCTGTCTTCTGTTTTCACTGCTGAAAGTATTCTCACCCCTGCAGGCAAGCGTAACAGAGTATCCTTAGCAAGGCACCTCTGAATATGTGTGAGAATGAGAGAGTTTATGTGTGTGTGTGTATGAGAGTGATTGAGAGAGTGTGTGAATGTGTGACTCTCCGTCTCTCTTTTTTGCTCTCCCTCCCGTCCCCGCTCACAGTGAGTTACGGAGCCAACACTGGCAACATGCTTTGCTTTACTCCCTCGTTCTCTCTTTCCATCTCTTTGTAAACCCTCCCCTTACCTTTTTCTGCCCTCCCTCTCTGTCACTCAGAACCCTCCTTCTTTTCCGATCACTCAAAAGCCCTCCTTCTCTTCATGTCCTCACACCCACCCCTCTCATTCCTCTTTTCCCTCCCCCTTTTCTGTTCTCTCTCTCTCCCCTCGCTGGGTGCCGTTGTGGTCTAGAGCGTTAAAAAATTAAACCTGCCTCATGCTTCCTTAAAGCGACAGATGAGACAGAGAGAGCGATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAGAGAGAGAGAGAGAGCAGGAGTCCTTATTTACACTCTGTGCCACAAACACACATGCCACTTAAAGTAACAGATATTAACAAAATAAA

Function

NR:

description
fibroblast growth factor 11a

GO: NA

KEGG:

id description
K04358 FGF; fibroblast growth factor

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000344_03025864_03058509.mRNA True 2434 mRNA 0.50 8 3024757 3058516

Neighbor

gene id symbol gene type direction distance location
CI01000344_02756871_02861561 NLGN2, NLGN2A, ACHE, NLGN2B coding downstream 163196 2756871 ~ 2861561 (-)
CI01000344_02729258_02730435 NA coding downstream 293546 2728570 ~ 2731211 (-)
CI01000344_02720070_02724425 NA coding downstream 300332 2719853 ~ 2724425 (-)
CI01000344_02716955_02719009 NA coding downstream 305357 2716646 ~ 2719400 (-)
CI01000344_02692791_02695643 EPOA coding downstream 329114 2692176 ~ 2695643 (-)
CI01000344_03152876_03154695 NA coding upstream 93630 3152098 ~ 3155687 (-)
CI01000344_03173512_03177748 RPL34P34, GM10086, RPL34.L, RPL34 coding upstream 114970 3173403 ~ 3177780 (-)
CI01000344_03210719_03211618 NA coding upstream 152126 3210642 ~ 3211618 (-)
CI01000344_03211733_03215881 NA coding upstream 153119 3211635 ~ 3216004 (-)
G500493 NA non-coding downstream 89768 2889144 ~ 2934989 (-)
G500474 NA non-coding downstream 358511 2610171 ~ 2666246 (-)
G500475 NA non-coding downstream 396458 2626147 ~ 2628299 (-)
G500485 NA non-coding downstream 409874 2608896 ~ 2614883 (-)
G500539 NA non-coding downstream 420838 2603680 ~ 2603919 (-)
G500613 NA non-coding upstream 59575 3118091 ~ 3143256 (-)
G500633 NA non-coding upstream 124181 3182697 ~ 3183134 (-)
G500634 NA non-coding upstream 124955 3183471 ~ 3183702 (-)
G500635 NA non-coding upstream 126184 3184700 ~ 3186198 (-)
G500638 NA non-coding upstream 138310 3196826 ~ 3197232 (-)
G500490 NA other downstream 279236 2738338 ~ 2745521 (-)
G499994 NA other downstream 904280 2118371 ~ 2120477 (-)
CI01000344_01794474_01807109 NTN5 other downstream 1208809 1793652 ~ 1807701 (-)
G499807 NA other downstream 1601583 1422351 ~ 1423174 (-)
G499804 NA other downstream 1605689 1414016 ~ 1419068 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) G53000 NA non-coding NC_056705.1 CM032074.1 14569501 ~ 14570245 (-)