CI01000352_01015676_01018437


Basic Information

Item Value
gene id CI01000352_01015676_01018437
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000352
NCBI id null
chromosome length 2255705
location 1013901 ~ 1018437 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000352_01015676_01018437.mRNA
ATGATGAGGGTGAAATTGAGATCTCTGTGGAAAATGTAACGGAAAATGATATCACACTGGGCAGCCGCACTATACTTGGCTGGTTGCACAATGTGGATGTTGTCTGCCCACTGCAGACAAAGCCTACTGAGGAGCAGAGCTCAGGGGTGTTGGATGACAATGTCACCTTACCAGTGCAGCAGCCCGGTCCTGATCCACCAGCTGAGCCCTGGGATCCACCTGTGGATCTGAGCCATTTGCAAGATGACCAACAAGAAAAGGTACGGCAGATGCTCAGAGACGAATGTGATGTCTTTGCAAAGGATGAGTGGGATACAGGATGCATTAAAGAGTTGGAGATGGACATACAGTTAAAAGACAATGAAGAGAGATGGGGTCTTCGTCTATGTATAAACTATAGACTGTTAAACGGGAAGACGCTGTCTGACCGTCATCCAATCCCGAGGATACAGGAGATCCTGGAAAACTTGGGCGGTAACTCTTGGTTCACGGTGCTGGACCAGGGGAAAGCTTACCACCAGGGCTTCATGAGCGAGAAGAGCAGACCCTGCACCGCATTCATTACACCCTGGGGGTTATACGAATGGGTGAGGATCCCGTTTGGGCTGACTAATGCCCCAGCATCTTTTCAACGCTACATGGAGGGATGCCTGGGAGATCTCCGAGATGAAATCTGTGTCCCGTATTTGGATGATGTCCTGGTGTTTAGCCCCACCTTTGAACAGCATGTTCAGGGTGTGCGTCAAGTTCTCCAACGGCAACGAGAGTGTGGGATAAAACTAAGGCCAAAGAAATGTGATTTCTTCAAGGGTGAAGTCTGCTATGTGGGCCGGATAGTCTCTGCGGAGGGATACAAAATGAATCCCAAAGAGGTGGAAGCGGTCCAAAAATTGAAACAAGAGGCTCCAACCACTGTACGAGGAATGAGAAAGCTGATCGGTTTCCTCAGTTATTACAGAGCTTATATACCAGATTTCTCTAGGGTGGCTAGACCTCTTTATGAACTCTTGGCTAAGCCCAAGTCTGAACTGAAACAGAGCCGAAAGAAAAAGGGAACTGGCCGAAAGTCTGTTCAGCTGCCGCCATCCCACCCAATCCAGTGGGCAGTGACCCATCAGGAGATAGTGAACCAAATCGTAGATCAGTTGACAAATCCTCCGGTGATGGCATACCCCGACCTGGAGGAACCATTCATCTTGCATGTAGATGCTTCGGAAGAGGGCCTTGGCGCAGTTCTGTACCAGCGTCAGAAAGGTGTCCTAAGAGTGATAGCTTATGGGTTGCGGACATTGACAGCAGCAGAGCGCAACTATAAGCTACACTCAGGAAAATTTGAATTCCTGGCGCTAAAGTGGGCCGTAACGGAACGCTTCCGAGATTATCTGTTTCACGCACCTCACTTTACGGTATATAGTGATAATAATCCTCTGACATATGTCACTAAATCAGCGAAGCTCAATGCTACCGGACACTGCTGGGTGTCAGAATTAGCAGATTATCGATTCACCCTAAAATACAGACCGGGGACAGCAAACCGAGATGCGGATTTCTTGTCACGAAGGTCAAAGCCCATTGATGAGATCATGCAAGAATGCACAGAGGAATGCCAACAGGAAGCTATTGAATGTATTGGGAAAGCTCTGGAGAAAAATCACAAGGGAGAAGTTAATTGGATCTCTGCCCTCACCTGTAATGTAGACGCACTACCAGAGGAGTATAACATCTCAGAACTGATTCAGCCTCTTGTACCAGAAGACATCAGAGTCACTCAAAATGCAGACGTAGTCATTAGTAGAGTCTTGACCCTGAAAAAAACGTGTGTGTACTTGAAACATAAAGACAAAGTGGTAGAGGATGGAGCGGTTAGACGGCTTCTCAGGGAGTGGCCTCGTCTGCAGACCGATGAAGATGGCATCCTCAGAAGGGAGACAGCAACAAGGAATCAGTTGGTTGTTCCTGAATCCTTAAAGCCTCTTGTCTATAAGCACTTACATGAGGAAATGGGGCATTTAGGTGCAGAAAGGATGGCTATGTATAGAGAAATCCTTGCGTGTAAATACGAACTCCAACACTGAACTGAGAAGAATAAA

Function

NR:

description
Retrovirus polyprotein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000352_01015676_01018437.mRNA False 2090 mRNA 0.48 3 1015661 1018437

Neighbor

gene id symbol gene type direction distance location
CI01000352_00980253_00998005 NA coding downstream 17656 980170 ~ 998272 (-)
CI01000352_00969428_00970236 NA coding downstream 45425 969223 ~ 970236 (-)
CI01000352_00936770_00961973 NA coding downstream 53688 936746 ~ 961973 (-)
CI01000352_00853555_00911922 SLC24A2 coding downstream 103739 853555 ~ 911922 (-)
CI01000352_00574884_00583420 NA coding downstream 432241 574858 ~ 583420 (-)
CI01000352_01020693_01021619 NA coding upstream 2256 1020693 ~ 1023846 (-)
CI01000352_01028559_01034351 NA coding upstream 9937 1028374 ~ 1034642 (-)
CI01000352_01052455_01113533 NA coding upstream 34018 1052455 ~ 1114854 (-)
CI01000352_01119562_01209513 NA coding upstream 101023 1119460 ~ 1209513 (-)
CI01000352_01385835_01391158 NA coding upstream 366795 1385232 ~ 1391321 (-)
G511006 NA non-coding downstream 2890 1012442 ~ 1012771 (-)
G511005 NA non-coding downstream 4040 1011247 ~ 1011621 (-)
G511000 NA non-coding downstream 14567 1000857 ~ 1001094 (-)
G510998 NA non-coding downstream 16505 998952 ~ 999156 (-)
G510820 NA non-coding downstream 193530 821833 ~ 822131 (-)
G511066 NA non-coding upstream 154586 1173023 ~ 1209596 (-)
G511071 NA non-coding upstream 169683 1188120 ~ 1201504 (-)
G511094 NA non-coding upstream 237101 1255538 ~ 1255779 (-)
G511096 NA non-coding upstream 238036 1256473 ~ 1256676 (-)
G510953 NA other downstream 17389 972660 ~ 997817 (-)
CI01000352_00081761_00086027 NA other downstream 925003 80953 ~ 86080 (-)
G511618 NA other upstream 1057096 2075533 ~ 2085310 (-)

Expression


Co-expression Network