G511775


Basic Information

Item Value
gene id G511775
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000353
NCBI id null
chromosome length 2149660
location 63548 ~ 63779 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU586827
AGAGAGAACACACTCACATACCACACTCTAATGCTGTTAGATGTTTTAAATATTACAACACGTTATTCTCTTTTATGTTCAATTAAAGGGTTAGTTCACCCAAAAATAAAAATTCTGTCATTAATTACTCACCCTCATGTCGTTCCACACCCGTAAGACCTTCGTTCATCTTCAGAACTCAAATTAAGATATTTTTGATAAAATCTGATGGCTCAGTGAGGCCTGCATCGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU586827 True 232 lncRNA 0.36 1 63548 63779

Neighbor

gene id symbol gene type direction distance location
CI01000353_00019814_00020188 NA coding upstream 42624 19814 ~ 20924 (+)
CI01000353_00266578_00266780 NA coding downstream 202799 266578 ~ 266867 (+)
CI01000353_00313956_00315335 NA coding downstream 250177 313956 ~ 315734 (+)
CI01000353_00319014_00320138 HOXD12A coding downstream 255005 318784 ~ 320772 (+)
CI01000353_00323864_00325448 HOXD11AA, HOXD11A, HOXD11 coding downstream 259506 323285 ~ 325897 (+)
CI01000353_00329672_00331600 HOXD10A, HOXD10 coding downstream 265761 329540 ~ 332088 (+)
G511754 NA non-coding upstream 4924 26516 ~ 58624 (+)
G511776 NA non-coding downstream 5536 69315 ~ 167373 (+)
G511840 NA non-coding downstream 103945 167724 ~ 167982 (+)
G511883 NA non-coding downstream 228282 292061 ~ 292286 (+)
G511901 NA non-coding downstream 323938 387717 ~ 388048 (+)
G511959 NA non-coding downstream 475652 539431 ~ 539661 (+)
G511885 NA other downstream 233868 297647 ~ 536588 (+)
CI01000353_00818227_00860645 OSBPL6 other downstream 781829 818227 ~ 864243 (+)
CI01000353_01429207_01429677 DBI, BRAFLDRAFT_98944 other downstream 1361892 1429207 ~ 1430652 (+)

Expression


Co-expression Network