CI01000365_00215623_00216039


Basic Information

Item Value
gene id CI01000365_00215623_00216039
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000365
NCBI id null
chromosome length 458031
location 214868 ~ 218389 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000365_00215623_00216039.mRNA
AGAAACGGCAGATCACATGCCATGCTATTTTGAGGAGTCAATTGTTGATGGATATTGTCAATTTTAGTTATAAAAAAGGTCATAAATTTGTTACACAAGTCACTAGAGTATAGGTGGAAAGGAAGGGTATCAGGAGGCCGTAAGATGTTATTTACTGTGGTAAACAAAGATCTAGTGTTCCCTTCATCTGACCTAATTATAGCAGAATAATAATCAGATTTAGCTGTCAAAAGAGCAATCTTGCAGGAGAGCATGTGATCTGTGTACATCTCTTTATGAATAGTAAGTCCAGTTTTAATGCATAGACTTTAACTCCTAATTACTGCTTATTAATAGTTAGTAAGGTAGTTGTTAAGTTTAAGTATTGGGTAGAATTAAGAATGTCGAATAAGGTCACGCAGAATAAGGCATTAATATGTGCATAATAAGTACTAATAAATAGCCAATATTCTAGTAATATGCATGCTAATAAGCAACTAGTTAAAAGACCCTAAAATAAAGTGTTGCCAAAATCTCTTAGGCCTTGTCTTTTTCTGAGTTTAAATAGCAAAATAAATGCACAGAACCAGTTCATTTGTAGTGCACTGGCAATGTAGTTTTATATAATTCGTTTAATTACGTTAATAAAAATTTAAAAAGACTTAAGGACTTACACAAAGATAACTTTGCAGTCACTTCAAAGTGACCTATGACATCCTATGGCATGAAATTCATCTACGTTTAAATGATCTCATGGATGTGGCTGTTGTGGTTCACAGTCATAGTGGGACCAGCTGCTACAGTAAAAATTCACATGACTTTCATATAGTTCTTTTACCCGGTTTAAATTCATATTGCCCATCATGCACAGTTGCCCTAAAGTCACCATGGTGGCAGTGGCGACGGGGTTTGGTCATCGCTGCTAGCAACTATATTTACATATGTAATTAATTTAATTCATAAAACATTTATAGATACACTGTTGACCCTTCCTTTAACCCTTAAACCTACCCATACCACCACCAAACCTGTCCCTAACCTTACACGTATCCCACCTCAATATTAGTAACACAAGTGTTTTGCAATACAACATGGACACAATAAGTTTTCTATAGACAGAGATCTGGAAAGAGGCAGATTTCTCTTTGACAGGGGCCTTCAACCCTGCTCCTGGAGAGTTACCGCCCTGCAGACTTCAGTTCCAACCCAGCTCCAACACACCGGCCTGTAATTTACAAGCAACTCAGAACACCTTGATTAGCTGGTTCATTTGTGTTTGATCGGAGTTAGAGCTGAACTCTCCAGGGTTGGCGACTCTATTTATGCTTTATAAGTCTTGGGTTGTGGCAAATAAAGTTTAAAGAACTTGAAGTTACCAAAGTTATAGTTGACACGATAACACGTTTTGCGTAAACAAATTATGAATGAATGTACCATTTTCTTATATTCATTGTTCATCATTTTCAGTAAAGTGAGTACTAGGGCTGCAACAACTAATCAATAAAATCTATTAATATCAATAATGAAAATAATCAACAACCAATTTGATTATTGATTAGTCGCATCTGTGTGCAATGCTCAGAATCCATCAGCCAGTCATGTCGCTTGACAGTGAATAACCTATTTCTATGGACTAAATGCATAGGGAAAATAGTGGAGGAAACAGAGTGAGCTGCTGCAGGAAAAGTACATAATCTAAGCTGTCCAAAACATGAGAATGCTTTATATTTATAAGCACTTCAAACTAAATCATAAGCATTTACCAGATCTTGCCCTCTCGTGCATTGACAGTTTTGTGAGCTTTTTACTGCCTCTGACACGTTTTCCTCAGCATATAATGTCTTGGGTTTTGACTGTAACCCTGGCTACCTGAGAAGGGAACAAGACACTGTGTCAGTGACTCTTTGGGAACGCTTCTGTGTGATTGCGTTTGAAGAATGTATGTAAAATCAGTCCAATGGTGAGGCACGATGGTACATCACGGGCGGGTGACGTCATGACCAGGAAAGCAGAAAAGCGCATCCGGGGGGAGATGGCTCTGTGAACGCTAAACTCTCACGAGACGGTGCGTGATTGAACATGGCAGCGCGCTGCTGCTAGAAGTCAGCAAACTTTTCTTGTTTTTCTTTTTTTTTTGTTTTTTTTTGTTTGTTCACTTCACCTCCCATAAATACAATAAACTGGATTACAATTCGGACCTGGATCACCTAGAAGACTACATCGACGAATGCTACAATAGACTCTGCATCATGGGATGCTTGATAGAAAACGCAATTCACAACGCAATTGTCTACTGTTACTACTGCTCGCCTCCGTCACCTCCGAAAATAAAACGATGAAATAAACAATTTTGGACTTACAAGCACGCAGCATGAGGGCCAACCTGATTTTCACCGGCCTCGCTGAACCACCCGCTGACGAACCCGAGAAAGCAGGTAAGGATTTTATGGTTAAACAGCTCGAACTCCCAACAGAAACTGTCAACAACATCACTTTTCACCGTCTAGGAAAAAAACTCAGTAACGCCACCCGACCCCGCCCAATCATTGTTAAATTCGAACATTTTAAACAAAAAGAATTGGTTCATCGGCAGGGCAAACAGTTAAAGGACACTCACTACGGACTTAACGACCAGTTTCCACAAGAAATCATCCATAGACGCAAACAGCTAATCCCCATCCGCAAGCAAATGATAAAAGAAGGCAAAAGAGCAATACTTACAGTGGACAAATTGTACATTGACGGACAGCTATTCAAAGACAAGGACATCACCCCCTGGCTCTACTAGAACCCTTCCCTCAACAATATCATCCCAGCCATAATATATTACCCCCCCCCCCCACCATTTTCTTGCATCTATAATATAATGCACCTATGTCTCGCTGCACTATACAAGTATGCACCTCAGTCACCTATGTTTTGTTTATCAAACTCTGTGTTGTTTTTGATTTTATTGTGTGTTTTGCTGTAAATGCTTAGGTTTGTCTAGTGTTATTATGTCCTATTGTTCTGTATTTGATGTTTGGCATAATTCACTTACACATACATGTCAGTAAAGAAATATTAACTCAACATGCAACTCAAATTCATAACCTGGAACATCCGTGGCGTTAGCTCTCAGAAAAAAAAAAAAAAAAAAAGTTCTTAACTATTTGGATAACCTACGGGCAGATATGTTTACCACAAGAAACACACCTTGCAGATTCAAAACAAAACACACTAAGATCAGCACAATTCACTCACTCATTTTCAGCCACTTATTATTCAAAACAAAGAGGAGTATGTATTTTGATAAGCAAAAAAATTCAATTTGTTCATAATACAACTATTTCAGACCCCGAAGGACACTTTATTATCATAAACATAACAATTAACAATAACCCGGTAACAATTGCCAACATTTACGGCCCAAATTCAGATAACCCTGCCTTTTTCCACACTTTTTTTTCGTCCATTTCAAATTTTTCCAACGCCCCGGTAATTATAGGAGGCGATTTTAACACCGTAAATGACCCATCACTTGACAGATCCGCAAGTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000365_00215623_00216039.mRNA True 3522 mRNA 0.38 1 214868 218389

Neighbor

gene id symbol gene type direction distance location
CI01000365_00102657_00113817 NA coding downstream 100876 102430 ~ 113992 (-)
CI01000365_00096865_00101128 ZBTB45 coding downstream 112684 96541 ~ 102184 (-)
CI01000365_00040221_00045449 CDC37 coding downstream 169419 39830 ~ 45449 (-)
CI01000365_00326334_00327173 NA coding upstream 107686 326075 ~ 327600 (-)
CI01000365_00436141_00445601 NA coding upstream 217049 435438 ~ 445601 (-)
G520429 NA non-coding downstream 84837 126197 ~ 130031 (-)
G520391 NA non-coding downstream 136575 77490 ~ 78293 (-)
G520393 NA non-coding downstream 140129 74399 ~ 74739 (-)
G520395 NA non-coding downstream 143109 71445 ~ 71759 (-)
G520405 NA non-coding downstream 185979 28672 ~ 28889 (-)
G520420 NA non-coding upstream 24117 242506 ~ 324746 (-)
G520491 NA non-coding upstream 55436 273825 ~ 291651 (-)
G520418 NA non-coding upstream 73344 291733 ~ 292900 (-)
G520565 NA non-coding upstream 176140 394529 ~ 398108 (-)
G520569 NA non-coding upstream 187312 405701 ~ 410085 (-)
G520557 NA other upstream 157776 376165 ~ 377658 (-)

Expression


Co-expression Network