CI01033333_00000158_00000477 (IGHV4-5)


Basic Information

Item Value
gene id CI01033333_00000158_00000477
gene name IGHV4-5
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01033333
NCBI id null
chromosome length 1853
location 149 ~ 477 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01033333_00000158_00000477.mRNA
GTGTTAATGGTCAGAGCCTGGAGTCCATCCCATCAAGTTCTGTTACCAAAAAGCCTGGAGAAATTTTGAACCTTTCCTGTAGAGGATCTGGATTTGATTTTGGACAATCTGGCATGCACTGGATCAGACAGCCAGCAGGGAAAGCATTGAACTGGATGGGGGTTATCTGGTATGATGCCAGTAAAACAGTGTATGCAAAAAGTGTTGAGGGACGAATAGAGATCACCAGAGATAATTCAAACAGCATGGTGTATCTGAAACTCTCTGGTCTGACAGCAGAGGATTCAGCTGTTTATTACTGTGCAAGATATATACAATGATGCAAAAAA

Function

symbol description
ighv4-5 Predicted to enable antigen binding activity and immunoglobulin receptor binding activity. Predicted to be involved in several processes, including activation of immune response; defense response to other organism; and phagocytosis. Predicted to be part of immunoglobulin complex, circulating. Predicted to be active in external side of plasma membrane.

GO:

id name namespace
GO:0009897 external side of plasma membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01033333_00000158_00000477.mRNA True 329 mRNA 0.42 1 149 477

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_026564 ighv4-5 coding NC_007114.7 CM002887.2 34096513 ~ 34096987 (-)
striped catfish (Pangasianodon hypophthalmus) LOC117598876 NA misc NC_047607.1 CM018553.1 21986949 ~ 21987425 (+)
tiger barb (Puntius tetrazona) G18120 ighv4-5 non-coding NC_056701.1 CM032070.1 7950861 ~ 7951668 (-)