XLOC_001440 (BX908740.2)


Basic Information

Item Value
gene id XLOC_001440
gene name BX908740.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 44534625 ~ 44536218 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00002360
AATGCTATGGGAATTTCCAGGGTTTCCATCACATTTGGAGTTTTCACACAAGAGCGTATTCTAGCCTTCATAAAAAGTTTAATACTGAACACACAACTGTGCTCCTCTgaaaagatgtgcatgacaataaCAGGTATGATCAATCGCATTTGTAAATTCATTGGAATTTGATTGATTGCCCAGCTCTAGTACACATCAAGCCACATTCAATAGaatttttaaaacatcaaaatCACACCCAACCCAGATAAAAGAGTCCTTTTACTGACACAAAAATAGCCCTGACCTTAATTACAGAGCCGTGTGTGTGGAGCAATCCCTAACCTGAttctcttagtcaaGCGCATTTGTTGTTGGGATGACATCACATAAGCTTTCACTATCAAATGTTGTGCAAACAAAGGTGATGTGGTGTTTGCAAAGCCTCAAGGCTTTTTGATGTTGTGCG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095781

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00002360 True 448 lncRNA 0.39 2 44534625 44536218

Neighbor

gene id symbol gene type direction distance location
XLOC_001439 cryba1l2 coding downstream 99918 44421920 ~ 44434707 (-)
XLOC_001438 CT583626.1 coding downstream 120996 44374034 ~ 44413629 (-)
XLOC_001437 slc43a3a coding downstream 373208 44141758 ~ 44161417 (-)
XLOC_001436 vwa11 coding downstream 450554 44074445 ~ 44084071 (-)
XLOC_001435 si:ch73-109d9.2 coding downstream 485827 44040211 ~ 44048798 (-)
XLOC_001441 tmx2b coding upstream 33064 44569282 ~ 44581937 (-)
XLOC_001442 slc43a1b coding upstream 55274 44591492 ~ 44638058 (-)
XLOC_001443 si:dkey-28b4.8 coding upstream 115509 44651727 ~ 44704261 (-)
XLOC_001444 si:dkey-28b4.7 coding upstream 170836 44707054 ~ 44710937 (-)
XLOC_001445 si:dkey-9i23.6 coding upstream 248575 44784793 ~ 44796531 (-)
XLOC_001427 CR385050.3 non-coding downstream 580998 43952298 ~ 43953627 (-)
XLOC_001417 NA non-coding downstream 917456 43518209 ~ 43617169 (-)
XLOC_001416 NA non-coding downstream 1379172 43130890 ~ 43155453 (-)
XLOC_001415 CR925858.1 non-coding downstream 1559750 42974760 ~ 42974875 (-)
XLOC_001412 BX927206.1 non-coding downstream 2256975 42277523 ~ 42277650 (-)
XLOC_001453 NA non-coding upstream 556726 45092944 ~ 45096173 (-)
XLOC_001458 LO017716.1 non-coding upstream 770943 45307161 ~ 45313876 (-)
XLOC_001464 NA non-coding upstream 1102914 45639132 ~ 45647846 (-)
XLOC_001466 NA non-coding upstream 1160616 45696834 ~ 45700570 (-)
XLOC_001468 NA non-coding upstream 1296557 45832775 ~ 45837990 (-)

Expression


Co-expression Network