CI01180000_10964009_10980799


Basic Information

Item Value
gene id CI01180000_10964009_10980799
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 10964009 ~ 10981104 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01180000_10964009_10980799.mRNA
GAGAGCAAGGAGGTGTACAAAAGACAAGTGATGTCTATCACATGTATTGCCATGGGGATCAGCTTTCTAGGCACCCTCTGCATGGCTCTCTACTGTCGGAACAGGAGAAGGAGAGAAAAGCTCCAGGCACACTTGAAAGAGAGTCGTAGCCAGAAAAACTACAACCTCAACTCTTCCAGCCTGACCTCTAAACCCAGCCTTAGGCCTCAGCAAAGCCTGCAGATCCAGAAGATCATTGTGTGCATTCTGCCAGAAGCAGAAATGGGTTTTTATGAGGAAGTCTTTCAAGGTGTGAAATTTAAATTGGATTTGTCTGCAGGTTCCATACAGTATTATAAACCCACAAGGTCCTTGCCACCACTTGGAGGCGCTGTTCGAGAGTCCAGTTTTGCTCAAAGCACTGCTGCCTCTACCAATCCACAGGTCACGTTGACAGGAAAACACACCAGGAGCAGTTCCCTTTCTCATAGTCCAGATCAGAGGAGTCGTTCTGCTCTTCGGCCTGCATCTCGTAGAACACCACCCATAACCAGAGGATGTCTGAATGCCATTGGTGGATCAAGAGATTCTGGTCCTGCCTACCAACATCTACAGGAAGTAGACAGCTCAGAGAGGGAGTCAGTGAGAAGGAACATCTCTGGCCCAGGTAATGACCTACATCAGGATTCCTTTTACAATATGCAAGCCTCACAATCCTCAAAATCTTGGAGTAGCCACTTAGACCACAGGTGCGCTAGGAGCCTCAGATCAGGCGGCCCTAGCCAGAGTCCTCCTGCTCCCTACCGACCCTGCTCTATCCCAATCATCCCCTCCGTCCACTCCTACCAGGATGAGGTCTCGTGTATGCAAACCACCCCTACTGATGGAAGCAGCCGTTCTAGCCCTCTGGAAAGCAAAGCAGATGCCAATCAACAATCCAACGTAACGGTCCCCAACCGAGCAGCTGGTAGACGAGAGGAAGTGGCCTCACTACTTGACGAGGCTCAGGAACAGCTCAGAGCGCTAGCACATGCCCAGAGGAAACAGGAGGACATCAGTAGCTTCGTCCCTCAGGGGGCCAAAGAGACTGTGTGTATCCTTTTAGCAAATGGGGGTGGACAAGGGGGAGTGGCCTCTTTTGGGCCCACGGAGACTCACTTAGTGAGCCCGAGAGACACACACAAAGATGCCACAAAGCCTGGCCAATGAGGAGTTGACAGGACTAACCACAAACGCCCCGTGTGTCTTGGGGCTTCGGAACGCTCTGCCAAAATACCACTGAAACCTACCGTTGAATTTCTGAGGACCTGCTGTGGGTAGAAGCGTGGGAGAGTGGCAGTCTCGAACATGTGAAAAGATAATTTATTTATATGCATTTATTTAAGGAGAAACTTCTACTTAGAAAAAGAAACCAAATAGTCTGTCATCTCCATGGTGTTTTTAACTGTATAAAATATACATAAATATATATAAATGGATATAAATATATGAATTCAAACTGGTGACCAAGTAC

Function

GO: NA

KEGG:

id description
K05457 NRG3; neuregulin 3

RNA

RNA id representative length rna type GC content exon number start site end site
CI01180000_10964009_10980799.mRNA True 1492 mRNA 0.48 6 10964009 10981104

Neighbor

gene id symbol gene type direction distance location
CI01180000_10921304_10932428 NA coding upstream 31466 10920404 ~ 10932543 (+)
CI01180000_10662835_10678837 NA coding upstream 284541 10662052 ~ 10681213 (+)
CI01180000_10529410_10533314 CCDC172 coding upstream 430346 10529410 ~ 10533663 (+)
CI01180000_10484149_10494886 NA coding upstream 468647 10483725 ~ 10495362 (+)
CI01180000_10473976_10478167 NA coding upstream 485746 10473184 ~ 10478263 (+)
CI01180000_11058495_11071337 NA coding downstream 77176 11058280 ~ 11071439 (+)
CI01180000_11103142_11105610 NA coding downstream 122038 11103142 ~ 11105838 (+)
CI01180000_11153499_11155781 NA coding downstream 172079 11153183 ~ 11157626 (+)
CI01180000_11165830_11178602 NA coding downstream 184726 11165830 ~ 11178640 (+)
CI01180000_11183402_11218624 ZSWIM8 coding downstream 201248 11182352 ~ 11219239 (+)
G685186 NA non-coding upstream 144136 10798449 ~ 10819873 (+)
G685184 NA non-coding upstream 167718 10792074 ~ 10796291 (+)
G685189 NA non-coding upstream 195773 10741901 ~ 10768236 (+)
G685182 NA non-coding upstream 223260 10727816 ~ 10740749 (+)
G685177 NA non-coding downstream 51477 11032581 ~ 11076280 (+)
G685421 NA non-coding downstream 105332 11086436 ~ 11086680 (+)
G685446 NA non-coding downstream 162781 11143885 ~ 11144229 (+)
G685449 NA non-coding downstream 166573 11147677 ~ 11147887 (+)
G685464 NA non-coding downstream 198148 11179252 ~ 11180770 (+)
G685188 NA other upstream 97833 10819986 ~ 10866176 (+)
CI01180000_09036547_09038313 MGST3B other upstream 1925117 9035736 ~ 9038892 (+)
G682232 NA other upstream 2595074 8368185 ~ 8368935 (+)
CI01180000_07694615_07695428 MRPL14 other upstream 3268342 7694529 ~ 7695667 (+)
CI01180000_07403482_07412752 HELLS other upstream 3494404 7403482 ~ 7413190 (+)
G685443 NA other downstream 152628 11133732 ~ 11141722 (+)

Expression


Co-expression Network