Gene
RNA
| Item | Value |
|---|---|
| gene id | G685188 |
| gene name | NA |
| gene type | unknown |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01180000 |
| NCBI id | null |
| chromosome length | 11503085 |
| location | 10819986 ~ 10866176 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU806595 | True | 45294 | TUCP | 0.36 | 3 | 10819986 | 10866176 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01180000_10662835_10678837 | NA | coding | upstream | 140518 | 10662052 ~ 10681213 (+) |
| CI01180000_10529410_10533314 | CCDC172 | coding | upstream | 286323 | 10529410 ~ 10533663 (+) |
| CI01180000_10484149_10494886 | NA | coding | upstream | 324624 | 10483725 ~ 10495362 (+) |
| CI01180000_10473976_10478167 | NA | coding | upstream | 341723 | 10473184 ~ 10478263 (+) |
| CI01180000_10428368_10431006 | NA | coding | upstream | 388580 | 10428368 ~ 10431406 (+) |
| CI01180000_10921304_10932428 | NA | coding | downstream | 54228 | 10920404 ~ 10932543 (+) |
| CI01180000_10964009_10980799 | NA | coding | downstream | 97833 | 10964009 ~ 10981104 (+) |
| CI01180000_11058495_11071337 | NA | coding | downstream | 192104 | 11058280 ~ 11071439 (+) |
| CI01180000_11103142_11105610 | NA | coding | downstream | 236966 | 11103142 ~ 11105838 (+) |
| CI01180000_11153499_11155781 | NA | coding | downstream | 287007 | 11153183 ~ 11157626 (+) |
| G685186 | NA | non-coding | upstream | 113 | 10798449 ~ 10819873 (+) |
| G685184 | NA | non-coding | upstream | 23695 | 10792074 ~ 10796291 (+) |
| G685189 | NA | non-coding | upstream | 51750 | 10741901 ~ 10768236 (+) |
| G685182 | NA | non-coding | upstream | 79237 | 10727816 ~ 10740749 (+) |
| G685177 | NA | non-coding | downstream | 166405 | 11032581 ~ 11076280 (+) |
| G685421 | NA | non-coding | downstream | 220260 | 11086436 ~ 11086680 (+) |
| G685446 | NA | non-coding | downstream | 277709 | 11143885 ~ 11144229 (+) |
| G685449 | NA | non-coding | downstream | 281501 | 11147677 ~ 11147887 (+) |
| G685464 | NA | non-coding | downstream | 313076 | 11179252 ~ 11180770 (+) |
| CI01180000_09036547_09038313 | MGST3B | other | upstream | 1781094 | 9035736 ~ 9038892 (+) |
| G682232 | NA | other | upstream | 2451051 | 8368185 ~ 8368935 (+) |
| CI01180000_07694615_07695428 | MRPL14 | other | upstream | 3124319 | 7694529 ~ 7695667 (+) |
| CI01180000_07403482_07412752 | HELLS | other | upstream | 3350381 | 7403482 ~ 7413190 (+) |
| G681667 | NA | other | upstream | 4160440 | 6655846 ~ 6659546 (+) |
| G685443 | NA | other | downstream | 267556 | 11133732 ~ 11141722 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| bowfin (Amia calva) | AMCG00003627 | ube2j1 | coding | CM030121.1 | CM030121.1 | 11940494 ~ 11957654 (-) |
