XLOC_014671



Basic Information


Item Value
gene id XLOC_014671
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 17321542 ~ 17321880 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00030190
GAAAAAGCCGTCAGAAGCTCTTCATAGTGGTGCGACAAACCAATCACCAATGAACTCTGTGTCCTGGGATGCAGCACAGGTCATTAACGGAGTTCCACccactaagcatcagaatggacTGTCCTCCAATGGAGACGCAGCAGACTTTGAGGGACAGTGGACAGAGTCAACCTGCTGACCCAATCATGGCCTTCGAGGGAGGAGAACCGTTCATGATGAAGGCGGGGCCTATAAAATCTCAACATGTGGCAG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00030190 True 252 lncRNA 0.51 2 17321542 17321880

Neighbor


gene id symbol gene type direction distance location
XLOC_014670 sf3a3 coding downstream 16547 17288529 ~ 17304995 (-)
XLOC_014669 NA coding downstream 43735 17275458 ~ 17277807 (-)
XLOC_014668 NA coding downstream 90522 17224646 ~ 17231020 (-)
XLOC_014667 stmn1a coding downstream 110614 17205143 ~ 17210928 (-)
XLOC_014666 NA coding downstream 120490 17200675 ~ 17201052 (-)
XLOC_014672 NA coding upstream 120 17322000 ~ 17329053 (-)
XLOC_014673 NA coding upstream 31764 17353644 ~ 17354733 (-)
XLOC_014674 nkiras1 coding upstream 55466 17377346 ~ 17385548 (-)
XLOC_014675 thrb coding upstream 192751 17514631 ~ 17658253 (-)
XLOC_014676 top2b coding upstream 366470 17688350 ~ 17774884 (-)
XLOC_014711 CR382300.3 misc upstream 2406810 19728690 ~ 19728755 (-)
XLOC_014665 NA non-coding downstream 207939 17109593 ~ 17113603 (-)
XLOC_014664 CR318590.1 non-coding downstream 321800 16999627 ~ 16999742 (-)
XLOC_014677 CR391921.1 non-coding upstream 512324 17834204 ~ 17996336 (-)
XLOC_014680 NA non-coding upstream 815834 18137714 ~ 18139894 (-)
XLOC_014683 BX649471.3 non-coding upstream 992448 18314328 ~ 18315321 (-)

Expression



Co-expression Network