XLOC_014971 (illr4)


Basic Information

Item Value
gene id XLOC_014971
gene name illr4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 40167363 ~ 40175800 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029510
GTGATACAGGCTTTGAGCAGCATCCCTCCAGAAGCATGTCTGAGGACGTGGTTTATTCAGAGGTCGTGTTTGTGAAGAAGAAACAGGCGGAcaaagatgatgaagatgatccaGATCAGTGTGATTTGCAGAAGAGGCGCTCATGTTGTGATGGTGTTCGGCTGGTACTGACGGCTCTGTGTGTGATCTTCACCACTGGACTGATCGCGCTCAGCTTCTTGTGCTATATGCAGGCTACGTCAAACCATAACTTTCAGAAAAAGCTTCAAGATCTTCAGGAGGTCCACAATGCACTGCAGGAGAACTTCACAGcattttcagCAGTGCTCGAACACATATATAACAGGGAACAAAATCTGTCCCGGGCTCTGAATAACAGTGCTCAATGTCCAGAGGACTGGCAATATCATGCAGGAAAATGTTACTACTTCtcttcaaacacaaacacactggaTTGGTTCAAAAGTCGAGATGCCTGTATTTCAGACGGCGGACATCTGGTGATCATAAACAACAGAGATGAACAGGAGTTCCTGAtgagcaaaacaaacaaatataaaggctcgttctggattgggctgacaGACAAATCTACTGAGGGTCAATGGCTGTGGGTGGACAACACGAAGCTGAGTACAGATATACGTTACTGGAATGGACAGGAACCAGATAACTGGAAAGGATATCGCAATGAGTACACTGAAGGAGAAGACTGTGCTCGCATTGAACAAAACAACTGGAACATTAACAGCTGGTTTGATGCATTCTGCACTATTGCATTCAGAAGAATATGTGAAACCAGATCCTCCAGATAAGCATAGTGGGCAAGGAAAGAGATGTGTCAAATATAAATGTATGCTCATGTCAAGGGAACTCCACCACCGCTGCTTTAGAACCTCATGATGCTTTAGTTTTGACTTTCTTTCGCCAATGTTTTGTGCTGCTTGCAAGTTGTGAAGCAATAAAGTCACTCATTTGAatctcta

Function

symbol description
illr4 Predicted to enable carbohydrate binding activity. Located in membrane. Is expressed in blood; intestine; kidney; and spleen. Orthologous to human CLEC4E (C-type lectin domain family 4 member E).

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0030246 carbohydrate binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050311-5 Predicted to enable carbohydrate binding activity. Located in membrane. Is expressed in blood; intestine; kidney; and spleen. Orthologous to human CLEC4E (C-type lectin domain family 4 member E).

Ensembl:

ensembl_id ENSDARG00000008075

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029510 True 986 mRNA 0.44 7 40167363 40175800

Neighbor

gene id symbol gene type direction distance location
XLOC_014970 NA coding downstream 408503 39754692 ~ 39758860 (-)
XLOC_014969 NA coding downstream 564672 39595429 ~ 39602691 (-)
XLOC_014968 CT583726.1 coding downstream 578208 39588596 ~ 39589155 (-)
XLOC_014967 CT583726.2 coding downstream 588361 39427180 ~ 39579002 (-)
XLOC_014966 CABZ01048582.1 coding downstream 963628 39203618 ~ 39203735 (-)
XLOC_014972 efcab1 coding upstream 6841 40182641 ~ 40186328 (-)
XLOC_014973 grn1 coding upstream 10877 40186677 ~ 40192249 (-)
XLOC_014974 grn2 coding upstream 20662 40196462 ~ 40199098 (-)
XLOC_014975 NA coding upstream 148161 40323961 ~ 40328584 (-)
XLOC_014976 CT027724.1 coding upstream 460772 40636572 ~ 40636691 (-)
XLOC_014711 CR382300.3 misc downstream 20438608 19728690 ~ 19728755 (-)
XLOC_014978 dre-mir-489 non-coding upstream 605368 40781168 ~ 40781271 (-)
XLOC_014981 NA non-coding upstream 733975 40909775 ~ 40985319 (-)
XLOC_014982 NA non-coding upstream 745352 40921152 ~ 40922192 (-)

Expression


Co-expression Network