XLOC_015340 (pimr198)


Basic Information

Item Value
gene id XLOC_015340
gene name pimr198
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 17540720 ~ 17542659 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030723
TTTGTTCGAGCACCTACTAAGCACAGACGTATTGGAGACAAAAGCTGGTTGAGAACCATCGCATCGCCGGGTCCAAATATCCTTCCATTTTCTGCAGTATACGAAGTTGGAGAGAAGCTTGGAGAAGGAGGCTTTGGCGAAGTGTTTGTGGGGCTCCACAAACTTAATCAACAACAGgttgCCATCAAATTTGTGAAGAAGACAAGAGCAGACCGGTATATCAGAATACCTGGGCTTTCCAAGCCGCTGTTGGCAGAAGTGTCATTAAACCTGCTGCTGAATCAACAACCGATAAGCCCTTACATCGTTCACATGATAGACTGGTTTGATGAGGAACAACGCTACATACTCATCATGGAGTACCCGCAACCCTGCGTGAATCTGCTCAGCTTTATAACTCAGAACAAAACAAAGAGTGAATCTGAGGCACGTAGCATTTTGTACCAAGTGGTCCTCGGATGCAAGCACTGTCTCGACAGAGGTATCTTCCATCGGGACATCAAGTTAAACAACTGCGTGATCAACACAGAGACACACCAAGTCAAACTGATAGACTTTGGCTGTGGAGATCTCCTCAAGAGTGTCTATGTGGGTGGATTTACTGGAGGATGCTGTCCACCAGAGTATGTTGCGACCCTGGCATATCGGGCAGACCCAACAACGGCGTGGTCTCTGGGCTATCTGATGTACAAACTGATGTGTGGCACCTACCCCTTTAAATCACTGGAAGACATGAAGACAAACAGTCTGACTTTTCCATTGGGCCTATCCAGAGAATTCCAGGATTTGATCTCGGGGTGCCTGATTACTGATCCAAACAAAAGATCCACCGTAGATGACATCCTAAACCACGAGTGGTTTCAGCAAATGCCAGCAGCAGGAGTCAG

Function

symbol description
pimr198 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000052296

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030723 True 887 mRNA 0.47 6 17540720 17542659

Neighbor

gene id symbol gene type direction distance location
XLOC_015338 pimr199 coding upstream 29541 17508323 ~ 17511179 (+)
XLOC_015337 BX640408.1 coding upstream 87996 17451656 ~ 17452724 (+)
XLOC_015336 NA coding upstream 89287 17448148 ~ 17451433 (+)
XLOC_015335 NA coding upstream 181700 17335817 ~ 17359020 (+)
XLOC_015334 ptger4c coding upstream 354349 17181777 ~ 17186371 (+)
XLOC_015341 NA coding downstream 68788 17611447 ~ 17613870 (+)
XLOC_015342 BX248089.1 coding downstream 115299 17657958 ~ 17658076 (+)
XLOC_015343 BX248089.2 coding downstream 164833 17707492 ~ 17714820 (+)
XLOC_015344 BX511224.1 coding downstream 474341 18017000 ~ 18022765 (+)
XLOC_015345 NA coding downstream 790104 18332763 ~ 18335711 (+)
XLOC_015332 NA non-coding upstream 629127 16906746 ~ 16911593 (+)
XLOC_015330 NA non-coding upstream 710956 16829689 ~ 16829764 (+)
XLOC_015329 CU462977.2 non-coding upstream 715901 16824759 ~ 16824819 (+)
XLOC_015346 CT737196.1 non-coding downstream 862910 18405569 ~ 18406117 (+)

Expression


Co-expression Network