XLOC_015367 (si:ch211-153l6.6)


Basic Information

Item Value
gene id XLOC_015367
gene name si:ch211-153l6.6
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 20430366 ~ 20443258 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030764
CGACGACTTACAGCAAACTGTCTGATAGCGGGCGTCTAGTGCAAGCTATAgcgagcagtttttttttttttttgtcagaaccATGAGAATTCTgtgcaaatatatttttagacATGTTCTCCTATATGCGCCTGTGTGTATGAGAGAGCTTGTCATGTCTGTCAGTGGAGTTACTGTGCTGCCATTGGTCGAATCCCACGCATTCAATCAGAGcttctgtcacacacacattcacacactaacacacacacacatacacacatacatgcacaggAAGAAACGAGACCTCCAGTGTTAAAGCAGCTCCAGCACTCACGAGAGCCACAGCTGGTGTGGGAAGGTCATATGGAATTGAATTAAATGAAGGCAAAGAGACTTCTGTAAATCAGCAACAGAAAGAGCAGGAATACCTCTCTGAAGCAGTCACCATGGAGACCAACCAGCTTTCAGAAATGGCTGATCTAACAGACTGTAAAATGGATCCTGGGTGTACAGAGGACCAGACATGTCAATTCACAGAGGACGCGAATGACTGTTTTGTTGCATATTTCTCAGAGTGCCTGGATACCAGACAGAGCAACCCCCACGAAGACTTGGATGGGCAAGAAAATGAAGATCTGCATAAGGAAAACAAAGCCATAAGCAATGAATGTGACAGCTCAGGTGAATCTGATGGGAGCAAAGACTCTCAAGAAGGCCTTATGCTTAAGGTCAACGAACCAGAAGCAAATGACACAGAATCATTGACCTTAGAGTCTCATGAAGACCCCCAGATGAATGACCAACCAGAAGAAGAAATGGAAATAAACAACACTTATGTACCAGAGGAGGAAGAACAGGAAGTACCAGAGGAGAAGGTGGAGCCGCAAGAAGAACCTGAGCTAGAGCAGCAAATGAATGGGCTGGTGATTTCTGAAGTCCCGAATGAATCTTGTCCAGATATGGATCAAGACAACTTAAGTGACTGTCTGGTTGTGGAGATGGCCATCATTTCATCAGATAGTGATGCTGAGGAGCCGTGGAGGTCTGTAGTTCCACCAGCAGTCGACAAGGAAGAGGCTGAAAATAATGAAGATCTCTTGGGCATGGATGAAGCAGAGATAAACCTGGAAGGGCAAGCAACACAAGAAGACGATGAAGTGAGTAACAGCAATGCTGAAGATGAAGCTTTGGCTTTGAGTATTAATGAAACCGAGATTCTAGAACAACCAGATTGTCCAACCGAATGTGAGCTGCAAGATATTTCTCTGGAGTCTACTGTTCATTACTGCAGCTTAACCAAAATTGCGGAAGATGAAGAAGAGCTTGCTAAAACTACCAAGCACAGCCTGCAGCGTTTGTCCTGCTCAACTTCAGAACTCGACAAGAAGTTGCCACAAGACTTCTGCGTGATTCAGGAAATGAAGAGTGAGAATGTCAGCACAGAGCATTTGGATTTCAGGGTGACTCGCAAGCAATGGCAGGAGATGGAAGAGCAAACCAGGGGACTGGTGCACCGGCCAATGGTGAAGCCGGGATCTTGCCAGGGTGGACACAGCTTCATGTACACTCCTGTCCGCAACATTGATCGTCCCAGAAGAGACCCTGACATAGAAAGCCTTAGCCTTGGGGATTACCAATACACTCAGTTCAGCCCCTGTTCAGAGGACTCCGGTCTAGATGACACAAGCTACAGGTCCCCTTATGATGAGCCGGAGACTCCAGTGGAGCGGGAGATCCGTGAAGCTCTTGAACGAGAGGAGAATTTCAGACGGGAGAGAGCAATGGCAAAGATGTCTTCTGGTGACTCTATGCAAAGTAAACCTCGGCCTGCCGTTCTTCAACACAGCAGATCAGAGCCTGGAGAGAGAGGACGGATGTTTGACACACCAGAGGACAGGTGCAGGTCTCAGAGGTCTCCTGGTGCAAGAACTCCAAGTTTGTCAATTACCGCATCCTCTGGAAAAAGTCCCACATACCATGAAATGACTGCCAACAATGTCATTATACTAGAACCGGATTCGTACCCCACCAGCCAACAGAAAAAAGGGAAGGGTGGGCTGCTCTCTCCAAAAACAAGTAGCTTCCAAGAATGGCCATCAGACATGAACAACGTCATCATCCTAGAGACGTCCAATCTCATCATTCGAAGTGCCTCTGAATTCTGCCTGAGCACTGCATGCCAGGAGACTCAAGAGAGCACGTTTCAAAACAATCCCTTCTTCAAACTGCGCTCCCACAGCACCCAGTCTCTGGTGGATCAGGAGATCAAGTTGGTCAAGCAAAGAGAAGAGGAGCTTAGGAGGCAGAGAGCACAGCTATATGTAAAGGAGAGATACGACACAGTGCTTGTGTCCCCCAGCCAACTGCAGAATTTCACTTACGAGCGATCAGGGGATGTAGCAGCAAAATCTAAGTCATCCCCCTCCTCTCCATCGAAGACACGCAAAATGGATCGATCTGCTATGTCCTGTGACCACAAGTTCCCTGAAGCACCCTACCATCGAGTCAGACGGAAAAGTGCCCTGGCCCAGAGGTGGGAGGCTGGAATCTTTGCCAATCATCAGGAACAAGACTGAGCAACTTGCCTAAATGAAGCATCAAAGCACAAATCCAATTTCCATTATATCCAGTATAAGCATGTACAAATAGTTTTAAGGTAAAAAGTTAATACAGATCTGGAACTATATAATAGGTGAGTACAAAAATATTCCCACAtaaagtaataccttttttttaaatatttgggctGCAAATAATATACTAATTTTGAATCCTgggtacatttttatattactgcagatgaaaaatgtatacaataatatattgcTAAATTGCACTGTGTACAAAAAAATCTTGGCAAACCttgagaaatgtatttattattttaatttcgcACTGCATACATCATTAACAACAATATTTTGAGTTTTAGATTAACAAATCAGTTCCTTCTTTAAAAGATATTTTGTCActtcaaaaattacatttaaatttgttttaacttGATcaaaagtgcaattcaaagggatatttcac

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-131121-98 No description available

Ensembl:

ensembl_id ENSDARG00000097187

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030764 True 3018 mRNA 0.44 4 20430366 20443258

Neighbor

gene id symbol gene type direction distance location
XLOC_015366 palmda coding upstream 2226 20406399 ~ 20428140 (+)
XLOC_015365 plppr4a coding upstream 58563 20331445 ~ 20371803 (+)
XLOC_015364 ptbp2b coding upstream 634773 19777146 ~ 19795593 (+)
XLOC_015363 NA coding upstream 751037 19659710 ~ 19679329 (+)
XLOC_015362 NA coding upstream 781025 19640952 ~ 19649341 (+)
XLOC_015368 NA coding downstream 28892 20472150 ~ 20526830 (+)
XLOC_015369 si:ch73-14h1.2 coding downstream 96144 20539402 ~ 20555743 (+)
XLOC_015370 olfml2bb coding downstream 161517 20604775 ~ 20615639 (+)
XLOC_015371 AL954134.2 coding downstream 188963 20632221 ~ 20633527 (+)
XLOC_015372 rxrga coding downstream 282426 20725684 ~ 20776841 (+)
XLOC_015360 BX088713.3 non-coding upstream 801572 19628697 ~ 19628794 (+)
XLOC_015359 NA non-coding upstream 813577 19614953 ~ 19616789 (+)
XLOC_015358 NA non-coding upstream 835172 19590044 ~ 19595194 (+)
XLOC_015384 dre-mir-26a-2 non-coding downstream 932209 21375467 ~ 21375594 (+)
XLOC_015385 NA non-coding downstream 988467 21431725 ~ 21436401 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000004_05800602_05802011 NA coding CI01000004 null 5800602 ~ 5802087 (+)