XLOC_015445 (angptl4)


Basic Information

Item Value
gene id XLOC_015445
gene name angptl4
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 24536762 ~ 24542518 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00030896
TGAGCCTGTGCTCTTGAGAGTGCTGCGACAGCTAACCGGTCTATACGACAAGTCAGATTATCAAAACCACTACAGACACAAAACAAGCAAGATGAAGGTACCACTGGCAAATCTGCTGTGCATCACAGTCCTGGCGAGCTCCGGGACGAGCTTCCCAATGGAGAGGAGAGGAGCTGCAGCCGGGAAAGAGAAGAGAGTGCAATATGCAGCGTGGGATGATGTGAACGTGCTCGCACATGGGATGCTGCAGCTTGGTCAGGGACTTAAGGAGCATGTGGACAAGACCAAAGGCCAGGTGAGAGACATCACCATTAAGATGAAGGTCTTTAATGTCACCGTATCCGAACTCGGCAAGCTGACTCAGCAGCTTCAAGAAGACAATGAGCTGCTGAAAGCAAAAGCCCAGAATCTGGAAGACAGTGAGAGCTTGGTTCTAAATGTGTCCACGGACCTGCGGCAGAAGACAGACGAGCTGCTCAAAGACAGACAGAAGGACCATGAGAGGATGAATAAGCTGGAAGAAAAAGTAGATGGCTTGATGCAAGGAGAGGGTTTGGAAGCTGCCAACAGCAACTACAGTGATGCCCGAATCATTCAGTGGATGCTGGAGGCGCAAAATAAGCGCATTGATGACCTGGTCGAGCGCATCAAGCAACAGCAGGAAAAACTGGACAAACAGAACATCCGCATCAGGACCCTGCAAAATCagATTACGATGAAAAACGAGCGACTGTCTCTGAAAAGGATGGAGGAAGACGTAAATCTGAACGCGAGCACTGAACAGCGAGATTCCCCTGTTGCTTTGGCTTCTGACTGTCATGAGTTGTTTCTGAGGGGCGAAACGTCAAGCGGGCTCTACACCATCCAGCCAAGTGACTCCCAGCCTTTTGAAGTCTACTGCGAGATGACACCCGAAGGAGGATGGACAGTCATCCAGAGACGCCAGGATGGATCTGTAGATTTTGATCAATTGTGGCAGGCATATCAGAATGGCTTTGGAAACCTAAATGGTGAGTTCTGGCTCGGCCTGGAGAAGATCCATTCTGTGTCCAAAGGTGGCAACTATATCCTCAAGGTGCAGTTCTCCGATTGGCGGGATGAGATTCAAAGCATCAGCTACCGATTCCATCTGAACGGCCAGGAGAACAACTATTCCCTCCGCATCCTAGAAAGTCCTGCTGGAAACACAGAGAGCTCTCTGCCCACCGAAACATCCGCAGTGCCGTTTTCCACCCGCGACAAAGACAACGACCAAAAAAATGACCTCAACTGTGCCAAACAGTTATCAGGCGGTTGGTGGTTTAGCAACTGTGGTCGCTCAAACTTGAACGGCAGGTATTTCGTTACTCCTGCTCCGAAACAGCGACACCAGAGAAAACAAGGAGTGTTTTGGAAAACCTGGCGTGGGCGCTACTATCCGCTGAAAACCACCACCATGATGATTGCACCCGCCGAGATTGTCAACAAATCATAGAGGACATGAGACCATAACCAATGTCAAGTGCTGAAAAGCCATTTAGAACCTGCCAAAACAACAAACTGGTGCTGAAAAGGCTCTATTAGGAGTGTTTCTCAGATCAGACAAAGTCTAAATCATGAATGTGATGGACACACAAATCCCAGTCTGGCCAAAAATAGGCTGTTTTATTCAATCAGACTGGAAAGAACTGAATGTGCCTGGAGCTCTGCATGCAGCCGCATGTTTTATATGGTGCAGGCCACTGTAAGGATCTGCAACATGTTTAGACAAATCTGGCAGGGTGACGTCAAAAGACCTGATGGTTTAGCACCATCGCGTGTACTATTAGGCTTGGAGATGAAATGAAAGAACCTTGCCACTAAAATACGGACCAAATAAGCTACATAAGCTTGAGCCAGTACTCTTTGAGAATGCTTATTATAATGGCACTGTGTATATTGAGGCATTATCCACAGACATTAGTAGATCTGCAGAACATTGAAAGATCTGTTGCCTGTTAAAGTCAAGATTCAAGTATCCTAACGTCAACGTTATTTTGTGGTACTCGCATGCTTTCCTCCACAAGATTTGATGATCTGAGTCTACTTGTGTGTTTTCCTGTATTGAAATCAAACGAGATGTTCCTGTGGGGATTGATTTTCTCAGTCACATTGACTGCCTTTAAACATCTGTGGATGTCACGTCTCTGTAAATAAGATGCATTTTCTTTGTAGCGTTACAGCTGTGCTCTTGCCTACTTCAAGCGCTCTGATTgtcatattatttaaatgttgtacAAAAATCATTATGTATATCTTTCTTATCGTTTTTTCTTATAATTTATGTTttgctaaaaagaaaaataactttgttattgtttttattaaaaaaatggtcTAACAGAGACCAATAAAAAtggattttatatataaaaaaaa
>TCONS_00030897
GGGAAAGGTCATGTTTACACCCTCAATTGTTCCAGTCAGGTCAGAATTGACATGTGAATCTGCCTTCGGTTAGCAGAtgtttaaccaaacacaccttgTAGGCTGTTGGAAATACAAAAATGCGTGTAGTATACCAACGTGGCATTTGTTTAATAACAACACTTCAGTGGATTTGAACTATACCCTGGAGTTCAAAACAAACTCCATGCTGGCTTCTGGGTTCTTGGGTGACATGTTCAAGGTCCAGTGTTTGAGATAAGGATTTAGTACACCATTAAACAATAAGATAAACACTTATCCTGGACGTCTTTGGCTTCTGACTGTCATGAGTTGTTTCTGAGGGGCGAAACGTCAAGCGGGCTCTACACCATCCAGCCAAGTGACTCCCAGCCTTTTGAAGTCTACTGCGAGATGACACCCGAAGGAGGATGGACAGTCATCCAGAGACGCCAGGATGGATCTGTAGATTTTGATCAATTGTGGCAGGCATAT
>TCONS_00030898
TTCAGTGGATTTGAACTATACCCTGGAGTTCAAAACAAACTCCATGCTGGCTTCTGGGTTCTTGGGTGACATGTTCAAGCTTTGGCTTCTGACTGTCATGAGTTGTTTCTGAGGGGCGAAACGTCAAGCGGGCTCTACACCATCCAGCCAAGTGACTCCCAGCCTTTTGAAGTCTACTGCGAGATGACACCCGAAGGAGGATGGACAGTCATCCAGAGACGCCA

Function

symbol description
angptl4 Predicted to enable enzyme inhibitor activity and signaling receptor binding activity. Acts upstream of or within apoptotic process involved in blood vessel morphogenesis and response to bacterium. Predicted to be located in extracellular region. Predicted to be active in collagen-containing extracellular matrix and extracellular space. Is expressed in endocrine pancreas; intestinal epithelium; intestine; and liver. Orthologous to human ANGPTL4 (angiopoietin like 4).

GO:

id name namespace
GO:0009617 response to bacterium biological_process
GO:0043066 negative regulation of apoptotic process biological_process
GO:0001525 angiogenesis biological_process
GO:0070328 triglyceride homeostasis biological_process
GO:1902262 apoptotic process involved in blood vessel morphogenesis biological_process
GO:0062023 collagen-containing extracellular matrix cellular_component
GO:0005615 extracellular space cellular_component
GO:0005102 signaling receptor binding molecular_function
GO:0004857 enzyme inhibitor activity molecular_function

KEGG:

id description
ko03320 PPAR signaling pathway
ko04979 Cholesterol metabolism
ko04147 Exosome

ZFIN:

id description
ZDB-GENE-041111-222 Predicted to enable enzyme inhibitor activity and signaling receptor binding activity. Acts upstream of or within apoptotic process involved in blood vessel morphogenesis and response to bacterium. Predicted to be located in extracellular region. Predicted to be active in collagen-containing extracellular matrix and extracellular space. Is expressed in endocrine pancreas; intestinal epithelium; intestine; and liver. Orthologous to human ANGPTL4 (angiopoietin like 4).

Ensembl:

ensembl_id ENSDARG00000035859

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00030896 False 2397 mRNA 0.45 7 24536762 24542518
TCONS_00030897 False 492 processed_transcript 0.44 3 24540047 24540765
TCONS_00030898 True 224 processed_transcript 0.50 3 24540209 24540725

Neighbor

gene id symbol gene type direction distance location
XLOC_015444 rps28 coding upstream 27064 24507597 ~ 24509698 (+)
XLOC_015443 NA coding upstream 38921 24484273 ~ 24497841 (+)
XLOC_015442 nr2f6a coding upstream 150380 24374305 ~ 24386382 (+)
XLOC_015441 pimr68 coding upstream 181438 24352497 ~ 24355324 (+)
XLOC_015440 CR384062.1 coding upstream 185722 24348589 ~ 24351040 (+)
XLOC_015446 NA coding downstream 60774 24603292 ~ 24612068 (+)
XLOC_015447 mast3a coding downstream 95849 24638367 ~ 24683365 (+)
XLOC_015448 pik3r2 coding downstream 158404 24700922 ~ 24755347 (+)
XLOC_015449 NA coding downstream 173796 24716314 ~ 24720787 (+)
XLOC_015450 ifi30 coding downstream 220049 24762567 ~ 24767470 (+)
XLOC_015437 BX000358.1 non-coding upstream 275466 24261217 ~ 24261296 (+)
XLOC_015434 NA non-coding upstream 512314 24022798 ~ 24024448 (+)
XLOC_015433 CR788285.2 non-coding upstream 521819 24013250 ~ 24014943 (+)
XLOC_015455 NA non-coding downstream 361148 24903666 ~ 24906615 (+)
XLOC_015456 NA non-coding downstream 369775 24912293 ~ 24927754 (+)
XLOC_015461 NA non-coding downstream 588005 25130523 ~ 25137789 (+)

Expression


Co-expression Network