XLOC_016069


Basic Information

Item Value
gene id XLOC_016069
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 1405511 ~ 1406153 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033345
TGGGTTATACATGTTTAATCatgcatttgttgttgttttttaaatcaaagcattttctcaaaatatgtgtcaaaataagatttgtcagcaaaaatcattctgctagctgaaacacagagaaagctgtggccaaattaagacacaaatcaccccagagtggatgaaatgACCCAATaggacagggGGTTAATACAtgtcttcataaaaaaaaaaagcagctttataaacacacaaatgTCTTTTCTTTACAAAAATACAGTGCAATTTATCAACCATACAGtgtcttttttcagtttattctcattcaaaaactaaaatttaaatgtgAACTTAAAGGATATATATGCAGTAGCAAAGATAAAGCCAACCTACTAATGGAAAGagtagtaaacaaacaaactaaaacatcCTTTGATCTGTGGAAAAACTCTTTTGTGAAAGA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033345 True 442 lncRNA 0.31 2 1405511 1406153

Neighbor

gene id symbol gene type direction distance location
XLOC_016068 ss18 coding downstream 40833 1348281 ~ 1364678 (-)
XLOC_016067 NA coding downstream 73969 1315166 ~ 1331542 (-)
XLOC_016066 ZNF521 coding downstream 126124 1264971 ~ 1279387 (-)
XLOC_016065 abcf3 coding downstream 178290 1218758 ~ 1227221 (-)
XLOC_016064 CABZ01084564.1 coding downstream 216804 1174778 ~ 1188707 (-)
XLOC_016070 rpe65a coding upstream 22543 1428696 ~ 1443692 (-)
XLOC_016071 gpaa1 coding upstream 46881 1453034 ~ 1468258 (-)
XLOC_016072 si:ch211-188c16.1 coding upstream 63917 1470070 ~ 1486023 (-)
XLOC_016073 c8b coding upstream 72072 1478225 ~ 1518360 (-)
XLOC_016074 dab1b coding upstream 116568 1522721 ~ 1569250 (-)
XLOC_016061 NA non-coding downstream 209599 931068 ~ 1195912 (-)
XLOC_016063 NA non-coding downstream 284209 1118752 ~ 1121302 (-)
XLOC_016057 NA non-coding downstream 675281 728660 ~ 730230 (-)
XLOC_016052 CABZ01117963.1 non-coding downstream 821944 583451 ~ 583567 (-)
XLOC_016076 NA non-coding upstream 239406 1645559 ~ 1647983 (-)
XLOC_016079 CU929426.1 non-coding upstream 765218 2171371 ~ 2172639 (-)
XLOC_016081 dre-mir-460 non-coding upstream 895205 2301358 ~ 2301434 (-)
XLOC_016082 NA non-coding upstream 1079282 2485435 ~ 2494300 (-)
XLOC_016090 FO818692.1 non-coding upstream 1719805 3125958 ~ 3126074 (-)
XLOC_016051 NA non-coding downstream 790655 552481 ~ 614856 (-)

Expression


Co-expression Network