XLOC_016103 (CABZ01063651.1)


Basic Information

Item Value
gene id XLOC_016103
gene name CABZ01063651.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 4631335 ~ 4642407 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031787
TGTGTCGCTTTCCCCTCAGAAAACAAAGCAGTGACTTATTGTGCTCAATGGATTGCGGATTGCGATGATTGTGTCCAACTTGAGTGTGCTCAGTTGCAGGAGGAACAGCGCGCTGTGTCTCGGTGCAGTGGAGGGACATTTGGAGGCGTCCTCCTCCTATCGCACCCTCAGTCCGACTGGACACATCCTCGTGGCGGTGAGCTTGGGATTCATCGGGACTTTCGGATTCCTCAACAACCTCCTGGTCCTCGTGCTCTTCGGCCGATACAAGGTGCTGCGCTCCCCCATCAACTTTCTGCTGGTGAACATCTGCTTGAGCGATCTCCTGGTTTGCGTTCTGGGGACGCCGTTCAGCTTCGCGGCGAGCACGCAGGGGCGATGGCTCATCGGGGACACTGGATGCGTGTGGTACGGCTTTGCCAACTCGCTGTTAGGCATTGTATCGCTCATCTCTCTGGCTGTGCTGTCATACGAACGCTACTGTACAATGATGGGCTCCACAGAGGCTGATGCGACCAACTACAAGAAGGTGATCGGTGGGGTGCTGATGTCCTGGATCTACTCTTTAATTTGGACCCTGCCTCCTCTGTTTGGGTGGAGCCGCTATGGCCCCGAAGGCCCCGGGACAACCTGCTCTGTAGACTGGACGACCAAGACCGCCAATAACATCTCCTACATCATTTGCCTCTTTATTTTTTGCCTGATCGTCCCCTTCCTGGTCATCATATTCTGCTATGGGAAGCTGCTGCATGCCATTAAACAGGTGAGT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000103674

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031787 True 769 mRNA 0.55 2 4631335 4642407

Neighbor

gene id symbol gene type direction distance location
XLOC_016102 FO704866.1 coding downstream 60232 4571013 ~ 4571103 (-)
XLOC_016101 adipoqb coding downstream 134977 4490604 ~ 4496358 (-)
XLOC_016100 NA coding downstream 512520 4114011 ~ 4118815 (-)
XLOC_016099 yme1l1b coding downstream 560485 4044636 ~ 4070850 (-)
XLOC_016098 rab18b coding downstream 598603 4019538 ~ 4032732 (-)
XLOC_016104 tnk2b coding upstream 86748 4729155 ~ 4797512 (-)
XLOC_016105 CU929154.1 coding upstream 170287 4812694 ~ 4814272 (-)
XLOC_016106 tfr1a coding upstream 206862 4849269 ~ 4874966 (-)
XLOC_016107 dlg1l coding upstream 257806 4900213 ~ 5074812 (-)
XLOC_016108 ptmab coding upstream 489557 5131964 ~ 5135125 (-)
XLOC_016095 NA non-coding downstream 1111169 3519583 ~ 3520166 (-)
XLOC_016092 CU633991.2 non-coding downstream 1215128 3412076 ~ 3416207 (-)
XLOC_016090 FO818692.1 non-coding downstream 1505261 3125958 ~ 3126074 (-)
XLOC_016113 NA non-coding upstream 807374 5449781 ~ 5453522 (-)
XLOC_016118 NA non-coding upstream 1058691 5701098 ~ 5702648 (-)
XLOC_016123 NA non-coding upstream 1196489 5838896 ~ 5840494 (-)
XLOC_016138 CABZ01077605.1 non-coding upstream 2123886 6766293 ~ 6766407 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000003_00981851_01059504 TMTOPSA coding CI01000003 null 981851 ~ 1059504 (+)