XLOC_016105 (CU929154.1)


Basic Information

Item Value
gene id XLOC_016105
gene name CU929154.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 4812694 ~ 4814272 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00031791
gtccacactacgccaccaaaaacggaaatcacgtgaccattcgtgcactctgagcatgcgcgttctagtataaacagaaagcatgtgtctcgctcggcatttggttattgttagtcaacaaacgtcGGTTGTACATTAAACGCGATGActaagaaagcaagagaggtatttttgtggacagacgacgaggtcgagttgttactaaacgtaacaaatgaataactgcacaatggcgcctaaaacagacaacagtgcaaacaacactcccatttctgtgcccaagTTGTTTACAGTattgtcttccggtagcgttaaagccatgtgttatagtcatgtgataggggaaggatatgcaatgacacaaaagccagTATGCAATCAGGTggcgaatctcagcagtcc

Function

GO:

id name namespace
GO:0099080 supramolecular complex cellular_component
GO:0099081 supramolecular polymer cellular_component
GO:0043005 neuron projection cellular_component
GO:0099512 supramolecular fiber cellular_component
GO:0099513 polymeric cytoskeletal fiber cellular_component
GO:0097458 obsolete neuron part cellular_component

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000100687

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00031791 True 402 lncRNA 0.44 2 4812694 4814272

Neighbor

gene id symbol gene type direction distance location
XLOC_016104 tnk2b coding downstream 15182 4729155 ~ 4797512 (-)
XLOC_016103 CABZ01063651.1 coding downstream 170287 4631335 ~ 4642407 (-)
XLOC_016102 FO704866.1 coding downstream 241591 4571013 ~ 4571103 (-)
XLOC_016101 adipoqb coding downstream 316336 4490604 ~ 4496358 (-)
XLOC_016100 NA coding downstream 693879 4114011 ~ 4118815 (-)
XLOC_016106 tfr1a coding upstream 34997 4849269 ~ 4874966 (-)
XLOC_016107 dlg1l coding upstream 85941 4900213 ~ 5074812 (-)
XLOC_016108 ptmab coding upstream 317692 5131964 ~ 5135125 (-)
XLOC_016109 phb2a coding upstream 363900 5178172 ~ 5199431 (-)
XLOC_016110 MFN1 coding upstream 524487 5338759 ~ 5356686 (-)
XLOC_016095 NA non-coding downstream 1292528 3519583 ~ 3520166 (-)
XLOC_016092 CU633991.2 non-coding downstream 1396487 3412076 ~ 3416207 (-)
XLOC_016090 FO818692.1 non-coding downstream 1686620 3125958 ~ 3126074 (-)
XLOC_016113 NA non-coding upstream 635509 5449781 ~ 5453522 (-)
XLOC_016118 NA non-coding upstream 886826 5701098 ~ 5702648 (-)
XLOC_016123 NA non-coding upstream 1024624 5838896 ~ 5840494 (-)
XLOC_016138 CABZ01077605.1 non-coding upstream 1952021 6766293 ~ 6766407 (-)
XLOC_016139 CU694525.1 non-coding upstream 2061479 6875751 ~ 6919316 (-)

Expression


Co-expression Network